Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02088 ATGGTCCGACCTGTCGGATTGACGATGCCGGAGCCAGTGAATACCAACACACAAAAAATGGAAGCCAGATTAGACGTTATAGGAAGGGAAATGAAGAGCATCAAACTTACTCTGTCAGAGATGCTGATTGAGCAACAGAAATTTCATGAACGATTCGTTTCAATGTTAACAAAGGCTGGGAAGATAACTGACGATGGCGAAAGGAAAATCGAAGCATCCGAGAATCGCTCAACATCAGAGGTTCATACTACAAATGGTTTGAAGAAACTAGAGGAAAAACAGTTTGAAGTCCCCCAACAGTCTGTCCAAGAGGTGATACAGCAGAATCAAGAGACTGTGAAGGAAGGGAAACAGAGCAACGTCGTACAATCTCGATCCGGTGATGACAAATCAAAATTTGGTGAAGTCGTAGTCGATTCTCGATCACTGAAGTGTCCGGTTAGCATTGTGTTGCCACCAAAAGCATTAGATCTGAAACCAGGCATTACGAGGAAGGAAACCCAAGCTGCTTGTTGCTCGGTAATGGTTTCGCGACCACCAAAGCCGCCAGACGCCGATATGTTCGCGGTGGTTATGGAAATCAAGCACATTGGCGATGTAACGAACAACAAGAATAGAATCGTCCAGATTCTAGTTGCTCCCACACCACCTATAGAACCGCCGGACACGGATGCTTGTGTTGTGGTGACAAATCGGAACTTGCATGCGTCGACAACAGAGAAGCAAGTTGTGGGAGGTCCGAGAACGACGCCACCACCACCAGAACCACCAGACGCAGGTTCACTAGATTTTTCTCCGGCACAGAAACATATATTAACGGCCAACCTCAATGCGATGACGGAGTTATGGGGTGCTGATCAGGCTGGGAAGATAACTGACGATGGCGAGAGGAAAATCGAAGCATCTGAGAATCGCTCAACATCAGAGGTTCATACTACAAATGGTTTGAAGAAACTAGAGGAAAAACAGTTTGAAGTCCCCCAACAGTCTGTCCAAGAGGTGATACAGCAGAATCAAGAGACTGTGAAGGAAGGAAAACAGAGCAACGTCGTACAATCTCGATCCGGTGATGACAAATCAAAATTTGGTGAAGTCGTAGTCGATTCTCGATCACTGAAGTGTCCGGTTAGCATTGTGTTGCCGCCTAAAGCATTAGATCTGAAACCAGGAATTACGAGGAAGGAAACCCAAGCTGCTTGTTGCTCGGTAATGGTTTCGCGACCACCAAAGCCGCCAGACGCCGATATGTTCGCGGTGGTTATGGAAATCAAGCACATCGGCGATGTAACGAACAACAAGAATAGAATCGTCCAAATTCTAGTTGCTCCCACACCACCTATAGAACCGCCGGACACGGATGCTTGTGTTGTGGTGACAAATCGGAACTTGCATGCGTCGACAACAGAGAAGCAAGTTGTGGGAGGTCCGAGAACGACGCCACCACCACCAGAACCACCAAACGCAAGTTCACTAGATTTTTCTCCGGCACAGAAACAGATATTAACGGCCAACCTCGATGCGATGACGGAGTTATGGGGTGCTGATCAGGTACGTTCAGTTGTTGTTGAGAATATTCTAGAGGAGATAGGGGTAGAATGGACAATCTATAATTTGGGTATGATTTTTGACCATATGGGTCAAGGTCAACTTAATGTTCTGGTTGTTTCTACATTAGTGGCAACATATTCCAAACTATGTGACCATGTTGGTGGAATCTCTGCACTGGTGGACATGTATTCCAAATTGGCTTGTTTGGATTTTGCTTTGGGGTTATTCAAAAAGTGGGGATTCATTGGGGAATTCAAGGTGGTGAATGCACACTATATGTTTTGTGGGAATGTGACTATCATTCCTTCATACATACACAAAGAAGCTATGGGTGTCAAAGTTTCCGACTCTCTAAATTTGGAAGACACTATCAGCATGTTGCCACCCAAATTCAGTGGGAGTGAAGTTTTGCTGGCAGTCAAATTCTTTGTAGCAGATTCGTTAAGTGTCATTCAGTGGGATCCTGGTGGCAAAGATTCTGTTCTAAGTGACTACTTTATAAGGAGAATTAGCGGGGAATGCTATTATGGTGCACAAgtagattttctaaaaatatggTCTGTATTAAAATGGTGCGTTGTCCATGTAGTCATTGCTGACTTCTCGGTGAGTGTTGTTGCTACATCGTCGGTGTTCATGTTTGATTGTGCTAGTGGGTCAGTAGCTCTTTGTCATGCCAAAGCCACTATGAGGATTGTTGATGTGCTTAACGCACAAAATAGTACCCTGGAAGTTGTTCATAAGGAAACCACAAGCCTTTTAGCCAAAGTAAGAATTGTTCCTGCCTTTAATTCAAAAAGGGAAATGATTGGCTTTGATTTTCTAATTTCTTACTTAGAACATACACTACAATCCTGCTGTTGGAAGGAACCAATTGGTGGAAATACTTATGAGATGGTTCTTCTTACACTCTATGGGTCTAATACACTTCATCTTTGGAATTTTGCTTGGTTGGTGCATCTGGGCAATGTTGATTTCTCTAATTTCACAAGCAAAGATTTTGGAAGACATTCTGTTAACCAGTTTGTAATTGCGTACAAAGAGAGCTGTGAAAGAAATTACATGGAAGACGAAGACCAATGA 2631 0.4367 MVRPVGLTMPEPVNTNTQKMEARLDVIGREMKSIKLTLSEMLIEQQKFHERFVSMLTKAGKITDDGERKIEASENRSTSEVHTTNGLKKLEEKQFEVPQQSVQEVIQQNQETVKEGKQSNVVQSRSGDDKSKFGEVVVDSRSLKCPVSIVLPPKALDLKPGITRKETQAACCSVMVSRPPKPPDADMFAVVMEIKHIGDVTNNKNRIVQILVAPTPPIEPPDTDACVVVTNRNLHASTTEKQVVGGPRTTPPPPEPPDAGSLDFSPAQKHILTANLNAMTELWGADQAGKITDDGERKIEASENRSTSEVHTTNGLKKLEEKQFEVPQQSVQEVIQQNQETVKEGKQSNVVQSRSGDDKSKFGEVVVDSRSLKCPVSIVLPPKALDLKPGITRKETQAACCSVMVSRPPKPPDADMFAVVMEIKHIGDVTNNKNRIVQILVAPTPPIEPPDTDACVVVTNRNLHASTTEKQVVGGPRTTPPPPEPPNASSLDFSPAQKQILTANLDAMTELWGADQVRSVVVENILEEIGVEWTIYNLGMIFDHMGQGQLNVLVVSTLVATYSKLCDHVGGISALVDMYSKLACLDFALGLFKKWGFIGEFKVVNAHYMFCGNVTIIPSYIHKEAMGVKVSDSLNLEDTISMLPPKFSGSEVLLAVKFFVADSLSVIQWDPGGKDSVLSDYFIRRISGECYYGAQVDFLKIWSVLKWCVVHVVIADFSVSVVATSSVFMFDCASGSVALCHAKATMRIVDVLNAQNSTLEVVHKETTSLLAKVRIVPAFNSKREMIGFDFLISYLEHTLQSCCWKEPIGGNTYEMVLLTLYGSNTLHLWNFAWLVHLGNVDFSNFTSKDFGRHSVNQFVIAYKESCERNYMEDEDQ 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02088 876 MobiDBLite consensus disorder prediction 66 86 - -
Tsu07g02088 876 MobiDBLite consensus disorder prediction 467 492 - -
Tsu07g02088 876 MobiDBLite consensus disorder prediction 237 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02088 Tsu-Chr7 22282456 22288802 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g02088 759 843 Calmodulin-binding Proteins AT2G36910 39.326 1.02e-09 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02088 - K00342 mtr:MTR_3g078560 41.5874