Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g02022 ATGTCGAAATGGTTTCTATGCCGCCAGAATGTTGTTTTAGGGTTCAtcacaacaaaatcaacaatccCTAAATTCGACCCTTTTTCATTCCCAATTTCACTCAGATTCTTCACCAAAGTCACAGCATCAGAATCAGATACACACCCATTCTCTGTATCATACCTAATCAACAATTTCGGTTTCTCATCTCAATCAGCTCTCACAGCTTTCAACAGCAAACAGGTTCGTTTCAAATCTCCAGATAAACCTAATTCTGTTATCAACTTTTTCAAAAATCACCATTTTTCAGACTCCAACATAAGCATCATCGTTACAAAAGCACCATGGTTACTTTCATCACAACCCAACAATGTAATTTTGCCAAAGTTACAATTTTTACTATCCAAAGGTGTTTCTTCCTCTGATATTGTTTCATTGTTAACCGCAAACCCTACGATTTTACAAATTAGTTTGGAGAATCGAATAATCCCTCTTTTTGAATTGTTAAGTAGGTTCTTGAAAACCAACAAGGATGTTATTGCTTGCTTAATTCGACATTCTTCGACTTCATTTGCTCGTACTCCGTATGATCTTATTGTGGCTAATGTGAATTTGATGACTGATTTTGGAGTATGTGATTCTAACATTGCTAGATTGTTTCAAACAAGGCCATCAATATTTGGTTCAACTGATTTGATTAAGTCATTGGAGGAAGTTAAGGGTTTAGGGTTTGATCCTTCGATGATTACTTTTGGGGTTGCTTTGATAGCTAAGAAATgtatgagtaaaaaaaattggaatcaGAAAGTTGATGCATTTAAGAAATGGGGTTGGTCTGATGAAGTTGTTTTTCAATCATTTAAATCGTGCCCTAGTTTGATGTTGGTTTCAATTGATAAGGTTAATTTGGTGTTGAGTTTTTGGGTCAATCAATTGGGTTGGAATTCCTTGGCACTTGCTAAATATCCAATTATGTTTACTTATAGTTTACATAAAAGGATCATTCCAAGGGCCTCAGTTTTGCAATTCCTTTTGATGAAAGGTTTGCGAGAAAAGACTGCAAGCTTAGTTACGCCATTTACTTATACTGAGAAATTGTTCTTGAGCAAGTTTGTTTTCAGCTTTAAGGAGGAGTCCGATTATCTATTCAAGCTATATGAGGAAAAAATGAAACTTGCATACACAGAGGAAAACAATGGCATGCCACTCACTAAATAG 1197 0.3425 MSKWFLCRQNVVLGFITTKSTIPKFDPFSFPISLRFFTKVTASESDTHPFSVSYLINNFGFSSQSALTAFNSKQVRFKSPDKPNSVINFFKNHHFSDSNISIIVTKAPWLLSSQPNNVILPKLQFLLSKGVSSSDIVSLLTANPTILQISLENRIIPLFELLSRFLKTNKDVIACLIRHSSTSFARTPYDLIVANVNLMTDFGVCDSNIARLFQTRPSIFGSTDLIKSLEEVKGLGFDPSMITFGVALIAKKCMSKKNWNQKVDAFKKWGWSDEVVFQSFKSCPSLMLVSIDKVNLVLSFWVNQLGWNSLALAKYPIMFTYSLHKRIIPRASVLQFLLMKGLREKTASLVTPFTYTEKLFLSKFVFSFKEESDYLFKLYEEKMKLAYTEENNGMPLTK 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g02022 398 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 21 388 - -
Tsu07g02022 398 Gene3D Transcription termination factor 3, mitochondrial 168 375 IPR038538 -
Tsu07g02022 398 Pfam mTERF 192 360 IPR003690 GO:0003690|GO:0006355
Tsu07g02022 398 Pfam mTERF 87 220 IPR003690 GO:0003690|GO:0006355
Tsu07g02022 398 SMART mt_12 210 238 IPR003690 GO:0003690|GO:0006355
Tsu07g02022 398 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Tsu07g02022 398 SMART mt_12 137 168 IPR003690 GO:0003690|GO:0006355
Tsu07g02022 398 SMART mt_12 309 343 IPR003690 GO:0003690|GO:0006355
Tsu07g02022 398 SMART mt_12 101 132 IPR003690 GO:0003690|GO:0006355
Tsu07g02022 398 PANTHER CGI-12 PROTEIN-RELATED 21 388 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g02022 Tsu-Chr7 20743133 20744329 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu07g02022 mTERF 5.2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g02022 K15032 - gmx:102663414 328.946