Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01990 ATGGAGCTGAATTCAACATTCATATCAGATGATAACCCTAACAAGGACATCAACATTGCCTTCTATAACATTCCAATCGTGAAACGTAGCCAATTATCTGTCTATATGCAACCTGTAACAATCGAACAAAGTGGGAACAGCTGTGCGAAGAGGGCAAATTTGCTGCTTATAAAAGGGCAGAATGCAGGAGACATCCAAATTTGCTGCTTTATGAATGTTATTCTTCGTCATGACAGTCGAACATGCCAGGGCTGGGTGATATTTACGGGTACTGTAGTTGTTATACCTGATAATGATATATTGCCTTTGGCGAGCCCTGGAGAGAGATCAGAATGGTGTAGGGGTGCTTCTCGGTGCAAGGGTTCTACACCTGTAAACAAAGGTGGGACAGGTATACTTCAAACATTGTTTTCCAAGATCTGTGTATACATCTGGGAAATCATCATCTGCTGCCGGCTTGACTGCAACTTAAGGAACCAGAAACTGGCTGGCGCTTTGAAGCTTGCTGACAATGGCAATTGCAGCATTGATGAATTTGACAAGATGAATATCACAGATCAGGGCCATGGAACAGCACACTATTGGTATCACAAAAGCAGGAATACAAGCAACACGCCGCTGCCAATCCTGCTGGGGGACAGTATGTACAATGTGGCTCTTCCACCAGCTATACTTTTAAGGTTTGATCTTGTATACATTATGGTTGATGACCCGGATGAAACAATAGATACCAACATGGCTCAACATATTGTAAAAGTTCATCAAATGTGTGATGATGCTCTTCATCCCGCATTCTCCACAGCAGAAGTAAAGCGTTACGTTGCCTATGCAAAAACTCTTAAACCAaagGTACAACCTCATCATGTTGATGAAGCAGAAAAAATGCTTAAAACATCAATAATAAGGCAGGACATATTCTCTGTcctgttttcaattttgattttggagCTAGCTTTCGGTGACAACTgcacattttactttttgtcCTGCCATGTGAAGTCGAGTGAGATTGATCTATCCGAGTTTCAAGAACTAAACAGGGAGGACGCCACAGTTCCCACTTTGCAAATTCATACTGGTGATTCTAATGGAAAGTACTGTCAAAATGGAAAAGGAAAGGGTCAAGTAACACCGAATCATTCCAAGGAAATGATTGGTACAGCTAATCTTCATCGAGGATTGTATGTGATTGATTCTGCAATGTCTGTTTCTAATTGTAACTCAGTTGTTAATAATGCTTTTGATGTTTGCAATTTAAAGTTAGGCCATTTATCCAAGTTAGAACCAATCACATCTCATCCTGTTTTTGATGATGATCATTTATCAAATGAATCATTTCATCTTAATAAGCAACCTGTGTCTAATACACCTCCACAAACTGAAACTTTGACTGGTCCACTTAATTCTATGGTTGAGTCAGTCTCTCCAATTCCTTCTCCTTCTGGATCAGCATCTGAGTCAGTGCCTAATTATGAACCTCTGTCCAATTCTAAGTCAATTCCTTCTGATTCCACCGCTGAAATTGCTTTCAGAAAATCTACTAGAACTGCTGTCCCCCCTAGCTATTTGAAAGATTATCATTGCTATTAG 1590 0.3925 MELNSTFISDDNPNKDINIAFYNIPIVKRSQLSVYMQPVTIEQSGNSCAKRANLLLIKGQNAGDIQICCFMNVILRHDSRTCQGWVIFTGTVVVIPDNDILPLASPGERSEWCRGASRCKGSTPVNKGGTGILQTLFSKICVYIWEIIICCRLDCNLRNQKLAGALKLADNGNCSIDEFDKMNITDQGHGTAHYWYHKSRNTSNTPLPILLGDSMYNVALPPAILLRFDLVYIMVDDPDETIDTNMAQHIVKVHQMCDDALHPAFSTAEVKRYVAYAKTLKPKVQPHHVDEAEKMLKTSIIRQDIFSVLFSILILELAFGDNCTFYFLSCHVKSSEIDLSEFQELNREDATVPTLQIHTGDSNGKYCQNGKGKGQVTPNHSKEMIGTANLHRGLYVIDSAMSVSNCNSVVNNAFDVCNLKLGHLSKLEPITSHPVFDDDHLSNESFHLNKQPVSNTPPQTETLTGPLNSMVESVSPIPSPSGSASESVPNYEPLSNSKSIPSDSTAEIAFRKSTRTAVPPSYLKDYHCY 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01990 529 SMART mcm 12 301 IPR031327 GO:0003677|GO:0005524|GO:0032508
Tsu07g01990 529 MobiDBLite consensus disorder prediction 472 503 - -
Tsu07g01990 529 ProSiteProfiles MCM family domain profile. 163 250 IPR001208 GO:0003677|GO:0005524|GO:0032508
Tsu07g01990 529 PANTHER BNAA02G22770D PROTEIN 214 304 - -
Tsu07g01990 529 Pfam MCM P-loop domain 215 254 IPR001208 GO:0003677|GO:0005524|GO:0032508
Tsu07g01990 529 Gene3D - 160 189 IPR027417 -
Tsu07g01990 529 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 214 304 IPR031327 GO:0003677|GO:0005524|GO:0032508
Tsu07g01990 529 Gene3D - 196 305 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01990 Tsu-Chr7 20278525 20284064 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01990 163 301 Core DNA Replication Machinery Family AT5G44635 48.734 1.08e-33 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01990 K02542 - rcu:8273210 143.665