Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01989 ATGACCCTTCCAAGtGATGAGACTCGTCAGGCATCCACATGTTGTCGAGCTTTACGAGGTAATGGCGAGCAAAACCAAAATTTACGTTGTTATGGACAATTGATCAGTGTTGTTAATAACTGTCATAGCAGAGGTGTGTGTCATCACGATGGATTACTCCATACAAAATGTGGCACTCCTGCGTATGTCGCTCCGGAAGTGATACACCGCAAGGGATATGATGGGATGAAAGCTGATATATGGTCGTGTGGTGTGATCCTATTGTTGTCGAAAATTCTGGATCCAAATCCAAAGAACAGGATATCAATTACCAAAATTATGGAAAGTTCTTGGTTCAAAAAGGGGTTAGAGAAGCCTATTGTTACTGACACAGACAAAAAAGAACTAGCTCCTCTCGTTGCTGATGGAGTATTCGGAGCTTGCGAGAATAGTGATCATGTTGATCTGTTGAAACCTTGTAATAATTTAAACGCGTTCGATATCATCTCCTTTTCATCAGGTTTTGACTTGTCTAGTTTGTTTgaggagaaagaaaaaaaagacagaaaTACGGTTCACGTCTAG 564 0.3918 MTLPSDETRQASTCCRALRGNGEQNQNLRCYGQLISVVNNCHSRGVCHHDGLLHTKCGTPAYVAPEVIHRKGYDGMKADIWSCGVILLLSKILDPNPKNRISITKIMESSWFKKGLEKPIVTDTDKKELAPLVADGVFGACENSDHVDLLKPCNNLNAFDIISFSSGFDLSSLFEEKEKKDRNTVHV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01989 187 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 49 88 - -
Tsu07g01989 187 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 88 181 - -
Tsu07g01989 187 Gene3D Kinase associated domain 1, KA1 152 187 - -
Tsu07g01989 187 SUPERFAMILY Protein kinase-like (PK-like) 25 120 IPR011009 -
Tsu07g01989 187 ProSiteProfiles NAF domain profile. 151 175 IPR018451 GO:0007165
Tsu07g01989 187 Pfam NAF domain 154 177 IPR004041 GO:0007165
Tsu07g01989 187 ProSiteProfiles Protein kinase domain profile. 1 174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01989 187 SMART serkin_6 12 112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01989 187 Gene3D Transferase(Phosphotransferase) domain 1 49 142 - -
Tsu07g01989 187 Pfam Protein kinase domain 54 88 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01989 187 PANTHER - 49 88 - -
Tsu07g01989 187 PANTHER - 88 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01989 Tsu-Chr7 20276547 20278071 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01989 19 181 CBL-interacting serine-threonine protein kinases AT5G45820 37.447 8.99e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Tsu07g01989 Pkinase 6.9e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01989 K07198 - gmx:100815651 201.445