Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01969 ATGATAGCTTTAACTGAAGCCATAACAATTGGAAGAACATTTGCGTCTATGAATGTTGTTGGTTCAATCACTTCCTGTTATGTAGCAAATGATTCTTTCTCTCGGTCAGCAGTAAATTTTATGGCCGGCTGTGAAACTGTGATCCTATATGGAATTCTCCCTTATGTCACAGGGGAGCTGCAGATTGACCAGTTGGAAACCCGTATGAAAGCAGTGAACTTGGTTGGCGATATAATTGCTCTTCCTGGAATTTCCACTTCTGAGGCATTTCAGCCAATACTTTCAGAGTTTTTAAAGAGGTTGACTGATATAGATTTTGGGGTTCGTATGTCAGTCCTTGTGCATATAAAGAGCTCTCTTCTGTCAAATCCTCAGAGGCCTGAAGCTCCTGAAATAATATATGTTGCTAAAGCTGAAGGTCGGACACAAAACTTGGAAACGAAGATTGAAGAATTCAGTAGACGCATGTTGGCTTTGGAGTCAGGCTCTTGTAGTGGCCACTCTCGTAGTTCTCATCCTCATTATGATGATGAATTGGATGATCAATCGGTTGATGACGAGGAAGATGATTAA 573 0.4101 MIALTEAITIGRTFASMNVVGSITSCYVANDSFSRSAVNFMAGCETVILYGILPYVTGELQIDQLETRMKAVNLVGDIIALPGISTSEAFQPILSEFLKRLTDIDFGVRMSVLVHIKSSLLSNPQRPEAPEIIYVAKAEGRTQNLETKIEEFSRRMLALESGSCSGHSRSSHPHYDDELDDQSVDDEEDD 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01969 190 MobiDBLite consensus disorder prediction 162 190 - -
Tsu07g01969 190 Pfam Sister chromatid cohesion protein PDS5 protein 48 126 - -
Tsu07g01969 190 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 43 131 IPR039776 GO:0007064
Tsu07g01969 190 PANTHER BINDING PROTEIN-RELATED 43 131 - -
Tsu07g01969 190 Pfam Sulfate permease family 16 48 IPR011547 GO:0016021
Tsu07g01969 190 Coils Coil 135 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01969 Tsu-Chr7 19992356 19993603 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01969 1 48 Inorganic Solute Cotransporters AT1G78000 56.923 2.76e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01969 K11267 - gmx:100816692 135.576