Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01948 ATGGGTTTCCGTTTACAGTCTATTCTAAGGGAGTCAGTAATTGCTAGACAAGCAGCATCAAAATCTACAGAAATTTCAAAGGCCTATGTTGCAGTGTATGTTGGAGAGAAACAGAAGCGGTTTGTGGTTCCAATATCATACTTGAACCAACCATTGTTTCAAGACTTGTTGAATCAAGCTGAGGAAGAGTTTGGATATGATCATCCCACAGGTGGCCTGACCATTCCTTGCGCAGAAGATGTCTTCCAACGTATAACTTCTAGTTTGAATGGGCTATAA 279 0.4086 MGFRLQSILRESVIARQAASKSTEISKAYVAVYVGEKQKRFVVPISYLNQPLFQDLLNQAEEEFGYDHPTGGLTIPCAEDVFQRITSSLNGL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01948 92 Pfam Auxin responsive protein 16 89 IPR003676 GO:0009733
Tsu07g01948 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 3 90 IPR003676 GO:0009733
Tsu07g01948 92 PANTHER AUXIN-INDUCED PROTEIN 6B 3 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01948 Tsu-Chr7 19801683 19801961 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01948 17 83 Calmodulin-binding Proteins AT3G43120 44.776 1.35e-17 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01948 K14488 - gmx:100816803 142.51