Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01947 ATGGGTTTCCGTTTAAATGTTATTCGACGGGCATCATTAACTTCTAACCAAGCAGCATCAAAATCTGTAGAAGTGAGAAAGGGCTATGTAGCGGTGTATGTTGGAGAGAAACAGAAGCGGTTTGTGATCCCAATATCATATTTGAACCAACCATCATTTCAAGATTTATTGAGTCAAGCTGAGGAAGAGTTTGGATACGATCATCCCATGGGTGGCCTCACCATTCCTTGCACCGAAGATGTGTTTCAACAGATAACTTCTCGCTTGAATGACCTATGA 279 0.4158 MGFRLNVIRRASLTSNQAASKSVEVRKGYVAVYVGEKQKRFVIPISYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCTEDVFQQITSRLNDL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01947 92 Pfam Auxin responsive protein 12 88 IPR003676 GO:0009733
Tsu07g01947 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Tsu07g01947 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01947 Tsu-Chr7 19800402 19800680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01947 14 83 Calmodulin-binding Proteins AT3G43120 47.143 6.84e-18 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01947 K14488 - gmx:106794448 158.688