Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01946 ATGGGTTTTCGTTTACCTAGTATCATAAAATCAAAGGCATCATTTTCAAAAGGTGCAGATGTTCCAAAGGGATATTTAGCAGTGTATGTTGGAGAGAAAATGAAGCGGTTTGTTATCCCTGTATCATGCTTAAACCAAACTTCTTTTCAAGAATTGTTGAGCCAAGCTGAGGAACAATTCGGATATGACCATCCGATGGGTGGTATCACTATTCCCTGCAGTGAAGATGTTTTCGTAGAAATCACTTCTAGCTTGAATTAG 261 0.3831 MGFRLPSIIKSKASFSKGADVPKGYLAVYVGEKMKRFVIPVSCLNQTSFQELLSQAEEQFGYDHPMGGITIPCSEDVFVEITSSLN 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01946 86 PANTHER SMALL AUXIN-UP RNA-RELATED 1 86 - -
Tsu07g01946 86 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 86 IPR003676 GO:0009733
Tsu07g01946 86 Pfam Auxin responsive protein 15 85 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01946 Tsu-Chr7 19799382 19799755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01946 20 78 Calmodulin-binding Proteins AT3G43120 54.237 7.79e-19 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01946 K14488 - gmx:100776943 135.576