Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01945 ATGGGTTTTCGTTTACCTGGTATTAGAAGGGAAGCATCTTCAAAAGATATCGATGTACCAAAGGGATACCTTGCAGTGTatgtaggagagaaaatgaagcGGTTTGTGATCCCAATATCATTTTTAAAGCAAACATCATTCCAAGATTTACTGAGCCAAGCCGAGGAACAATTTGGATATGACCATCCAATGGGCGGTCTTACTATTCTTTGTGGAGAAGATCTTTTCTTATATATCACTTCTCGCTTGAATAGGCACTAA 261 0.3563 MGFRLPGIRREASSKDIDVPKGYLAVYVGEKMKRFVIPISFLKQTSFQDLLSQAEEQFGYDHPMGGLTILCGEDLFLYITSRLNRH 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01945 86 Pfam Auxin responsive protein 13 83 IPR003676 GO:0009733
Tsu07g01945 86 PANTHER SMALL AUXIN-UP RNA-RELATED 7 84 - -
Tsu07g01945 86 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 7 84 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01945 Tsu-Chr7 19797969 19798229 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01945 18 86 Calmodulin-binding Proteins AT3G43120 50.725 5.79e-20 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01945 K14488 - gmx:112998524 140.198