Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01944 ATGTTACCTAGTATCATCAAATCAAGGGCATCATCTTCAAAGGGCATGGACGTGCCAAAGGGTTATTTAGCCATATATGTTGGAGAAGAAATGAAACGAGAGTTAGCAGGTATTCAATTCAAGCTAGAAGTGATTTCTAAGAAAACATCTTCTCTGCAAGGAATAGTGATACCACCCATTGGATGGTCATATCCGAATTGTTCCTCAGATTGGCACAGTAAGTCTTGGAATGAGATTTGGTTCAAGTATGATACGGGAATCACAAACCTCTTCATTTTCTCTCCAACATACACAGCTAGATATCCCTTTGGGACACCTTTTGAAGATGACACCTTTGATTTGATGATACTAGGTAAACGAAAACCCATTGTTGCATCATTAACTGCCAATCAAGCAGCATCAAAATCTGTAGAAGTGAATAAGGGCTATGTTGCGGTTTATGTTGGAGAGAAGCAGAAGCGGTCTGTGATCCCACTATCATACTTGAACGAACCATCATTTCAAGACTTGTTGAATCAAGCTGACGAAGAGTTTGGGTATGATAGCCCCATGGGTGGTGGCCTCACTATTCCTTGCACCGAAGATATCTTCCAAAATATCTTCTCGCTTCCGTTGGCTATGAATCTCAAACTGCAGTATAGCATACTGACATAG 654 0.4083 MLPSIIKSRASSSKGMDVPKGYLAIYVGEEMKRELAGIQFKLEVISKKTSSLQGIVIPPIGWSYPNCSSDWHSKSWNEIWFKYDTGITNLFIFSPTYTARYPFGTPFEDDTFDLMILGKRKPIVASLTANQAASKSVEVNKGYVAVYVGEKQKRSVIPLSYLNEPSFQDLLNQADEEFGYDSPMGGGLTIPCTEDIFQNIFSLPLAMNLKLQYSILT 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01944 217 PANTHER SMALL AUXIN-UP RNA-RELATED 128 200 - -
Tsu07g01944 217 PANTHER SMALL AUXIN-UP RNA-RELATED 3 34 - -
Tsu07g01944 217 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 128 200 IPR003676 GO:0009733
Tsu07g01944 217 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 3 34 IPR003676 GO:0009733
Tsu07g01944 217 Pfam Auxin responsive protein 121 202 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01944 Tsu-Chr7 19794110 19796779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01944 138 203 Calmodulin-binding Proteins AT4G34750 42.424 2.23e-12 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01944 K14488 - gmx:112997918 125.561