Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01943 atgggTTTCCGTTTAACTAATGTTATTCGACGGGCATCATTAACTGCCAACCAAACAGCATCAAAATCTGCAGAAGTGAGAAAGGGCTATGTTGCAGTGTATGTTGGAGAGAAACAGAAGCGGTTTGTGATCCCAATATCATATTTGAACCAACCATCATTTCAAGATTTATTGAGTCAAGCTGTGGAAGAGTTTGGATACGATCATCCCATGGGTGGCCTCACCATTTCTTGCACCGAAGATGTGTTTCAACACATAACTTCTCGCTTTAATGAGCTATGA 282 0.4007 MGFRLTNVIRRASLTANQTASKSAEVRKGYVAVYVGEKQKRFVIPISYLNQPSFQDLLSQAVEEFGYDHPMGGLTISCTEDVFQHITSRFNEL 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01943 93 PANTHER AUXIN-INDUCED PROTEIN 6B 6 91 - -
Tsu07g01943 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 6 91 IPR003676 GO:0009733
Tsu07g01943 93 Pfam Auxin responsive protein 11 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01943 Tsu-Chr7 19792958 19793239 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01943 15 86 Calmodulin-binding Proteins AT3G43120 43.056 2.94e-16 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01943 K14488 - gmx:100816803 150.984