Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01942 ATGGGTTTTCGTTTACCAAGTATTATCAGAAGGGCATCATCATCAAAAGGTGTGGACGTGCCAAAGGGATATCTAGTAGTATatgtaggagagaaaatgaagcGGTTTGTGATCCCTATATCATATTTGAGCCAAACCTCATTTCAAGAATTGTTGAGCCAAACTGAGGAGCAATACGGATATGACCATCCCATGGGTGGTCTCACAATTCCTTGCAGAGAAGACGTTTTCTTAGATATTACTTCTCAATTGGATTGA 258 0.3682 MGFRLPSIIRRASSSKGVDVPKGYLVVYVGEKMKRFVIPISYLSQTSFQELLSQTEEQYGYDHPMGGLTIPCREDVFLDITSQLD 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01942 85 Pfam Auxin responsive protein 13 82 IPR003676 GO:0009733
Tsu07g01942 85 PANTHER SMALL AUXIN-UP RNA-RELATED 1 84 - -
Tsu07g01942 85 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 84 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01942 Tsu-Chr7 19791489 19791746 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01942 19 77 Calmodulin-binding Proteins AT3G43120 55.932 7.62e-20 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01942 K14488 - gmx:100787155 134.806