Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01932 ATGAAATCCAGTTTGAATAATCATGTTATCCCTCTTTATAAATTGGTATCTCGGTTTCTTAAATCGGCACAAAGAGCTATTGCTTCTGTAATTTCATTTCCTTTTTTGCTTTGTAGTGATTATGTGATTCCTAATGTTAATTTAATGGTTGATAAGGGTGTTTGCGATTCGAGTATTTTTAGAATTCTTACTACTAGACCGAATATTATCTTTTGTAAGACTAGGGTTTTAGAGGAGATGGTGGAGGAATTGAAAAACATGGGATTTGATCCTTCTAAATCATATTTTGGTGATGCATTGCTTGCTAAGTTAGGTTTTAGTAAATCCAAATGGGATGAGAAAATTGATACTTTTAAGAAATGGGGTTGGTCCGAGGAAACTATATTGGAAGCTATTAGGAAGCAGCCGAAATGTATGTTAGTTTCGACCGATAAAATCTATAGGGTGATGCAGTTTTGGGTTAATGATTTAGGTTGGGATTCTTCTTATCTTGCTAAGGGATCAGGGATTTTTTTATACCATTTGGAGAAAAGGATCGTTCCAAGATCTATGGTTGTCTTTTGTCTTCAAACTAAGGGTTTGAGAAGTGAGAGTGCTAGCTTGCTTTCTCCATTTTATCTGTCTGAGAAAGTATTTTTGGAAAGGTTTGTGTTCTGTTTTAAAGGGGAGGAAACTGCTCATCTATTGAATTTATATCGCACTATGATGAAGGTGGGAGATCAGAAGGAAAGTAGCATAGGAGAATCATGA 750 0.352 MKSSLNNHVIPLYKLVSRFLKSAQRAIASVISFPFLLCSDYVIPNVNLMVDKGVCDSSIFRILTTRPNIIFCKTRVLEEMVEELKNMGFDPSKSYFGDALLAKLGFSKSKWDEKIDTFKKWGWSEETILEAIRKQPKCMLVSTDKIYRVMQFWVNDLGWDSSYLAKGSGIFLYHLEKRIVPRSMVVFCLQTKGLRSESASLLSPFYLSEKVFLERFVFCFKGEETAHLLNLYRTMMKVGDQKESSIGES 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01932 249 Pfam mTERF 44 212 IPR003690 GO:0003690|GO:0006355
Tsu07g01932 249 PANTHER CGI-12 PROTEIN-RELATED 1 241 IPR003690 GO:0003690|GO:0006355
Tsu07g01932 249 Gene3D Transcription termination factor 3, mitochondrial 1 223 IPR038538 -
Tsu07g01932 249 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 1 241 - -
Tsu07g01932 249 SMART mt_12 27 55 IPR003690 GO:0003690|GO:0006355
Tsu07g01932 249 SMART mt_12 161 195 IPR003690 GO:0003690|GO:0006355
Tsu07g01932 249 SMART mt_12 129 160 IPR003690 GO:0003690|GO:0006355
Tsu07g01932 249 SMART mt_12 60 90 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01932 Tsu-Chr7 19643947 19645873 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu07g01932 mTERF 5.8e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01932 K15032 - gmx:102667698 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01932 07 19643947 19645873 Tsu07g01932 07 19643947 19645873 ECH