Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01931 ATGTTCAAATCattttcaacaacaacattGCACCACTCACCCttccaattttctctcaaattCCTCACCACTTCACCCTCACACTCATTCGCTGCATCTTATCTCATTGACAAATTCGGTTTCTCATCAGAATTCGCTTTCAAAGCTTCAAAAATCGTTCATTTCAAAACCTCAAAAAAACCCGATTCAGTTCTCAATTTCTTCACAACTCACGGTTTCACCGATTCAGATATTCACAGCATCATCAAAAGAGAACCTTGGCTTCTTTCCTGTGATACCCAAAAAAGAATTCTCCCGAAGTTTCAATTTTTACTCTCCAAAGGCGCTTCTAATTCTGACATTGTTCGTATGGTTGTAGGTAACCCTAGATTCTTGAAACCCAGTTTGAATAATCGTGTTATCCCTGTTTATAAATTGGTAACTCGGTTTCTTAAATCGGAACAAAGGGCTATTGCTACTGTAATTTCACTTCCTTATTTGCTTTGTAGTGATTATGTGATTCCTAATGTTAATTTAATGGTTGATAAGGGTGTTTGCGATTCGagtatttctaaaatttttagTAGTAATATTATCTTTTGTAAGCCTAGGGTTTTAGAGGATATGGTGGAGGAGTTGAAAAACATGGGATTTGATccttctaaaatatattttggtgaTGCATTGCTTGCTAAGTTAGGTTTAAGTAAATCCAAATGGGATGAGAAAATTGATACTTTTAAGAAATGGGGTTGGTCTGACGAAACTATTTTGGAAGCTATTAGGAAGCAGCCCAAATGTATGTTAGTTTCGACCGATAAAATCAATAGGGTGATGCAGTTTTGGGTTAATGATTTAGGTTGGGATTCTTTTTATCTTGCTAAGGGACCGGGGATGTTTTCTTATGGTTTGGAGAAAAGGATCGTTCCAAGAGCTATGGTTGTCTTTTGTCTTCATTCTAAGGGTTTGAGGAGCGAGAGTGCCAGCTTGCTTTCTCCATATTTTGTGTCTGAGAAATTGTTTTTGGAAAGGTTTGTGTTACGCTTTAAAGAGGAGGAAACTGCTCATCTATTGAATTTATATCGCACTATGATGAAGGTGGGAGATAAGAAGGTAAGTAGCATAGGAGAATCATGA 1116 0.3513 MFKSFSTTTLHHSPFQFSLKFLTTSPSHSFAASYLIDKFGFSSEFAFKASKIVHFKTSKKPDSVLNFFTTHGFTDSDIHSIIKREPWLLSCDTQKRILPKFQFLLSKGASNSDIVRMVVGNPRFLKPSLNNRVIPVYKLVTRFLKSEQRAIATVISLPYLLCSDYVIPNVNLMVDKGVCDSSISKIFSSNIIFCKPRVLEDMVEELKNMGFDPSKIYFGDALLAKLGLSKSKWDEKIDTFKKWGWSDETILEAIRKQPKCMLVSTDKINRVMQFWVNDLGWDSFYLAKGPGMFSYGLEKRIVPRAMVVFCLHSKGLRSESASLLSPYFVSEKLFLERFVLRFKEEETAHLLNLYRTMMKVGDKKVSSIGES 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01931 371 Gene3D Transcription termination factor 3, mitochondrial 146 346 IPR038538 -
Tsu07g01931 371 SMART mt_12 283 317 IPR003690 GO:0003690|GO:0006355
Tsu07g01931 371 SMART mt_12 79 110 IPR003690 GO:0003690|GO:0006355
Tsu07g01931 371 SMART mt_12 115 146 IPR003690 GO:0003690|GO:0006355
Tsu07g01931 371 SMART mt_12 184 212 IPR003690 GO:0003690|GO:0006355
Tsu07g01931 371 SMART mt_12 251 282 IPR003690 GO:0003690|GO:0006355
Tsu07g01931 371 Pfam mTERF 65 215 IPR003690 GO:0003690|GO:0006355
Tsu07g01931 371 Pfam mTERF 170 325 IPR003690 GO:0003690|GO:0006355
Tsu07g01931 371 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 7 362 - -
Tsu07g01931 371 PANTHER CGI-12 PROTEIN-RELATED 7 362 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01931 Tsu-Chr7 19631376 19633018 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu07g01931 mTERF 4.6e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01931 K15032 - gmx:102667698 323.553