Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01930 ATGTTCAGGAAATGGTTTCTCTCCCAGAATCTTCTTTTAGGTATCAACAGAACCCCAAAGTTCCACCCTTTTATCCAACAATTTTTGTTCCCATTTTCACCCTCCAGATTCTGCAACACCACAACAACAACTAcatcagaatctgaatcagaaTCAGACACACACCCATTTGCTGTATCATACCTCATCAACAATTTTGGTTTCTCAACTCAATCTGCTCTCAAAGCTTTCAATCAAAATCAGGTTCGTTTCAAATCTCCGGATAAGCCTAATTCAGTTTTTACCTTTTTTAAAGACCATCATTTTTCAGAATCCAACATACTCATCATCATTAGAAAATCACCGTGGTTACTTTCAGCAGAACCCCATAAAAACTTATTgccaaagtttcaattttttctctccaaagGTGTTTCTTCCTCCGATATTGTCCCATTGTTGACAGCAAACCCTAGAATTTTACAAAGTAGCTTGGAGAAACGAACAATCCCTCTTTTTGAATTATTAACTAGGTTCTTGAAATCCAACAAGGATGTCATTGTATGCTTAATTCGACATTGGATGTCATTTGCTCTTTATCCCTATCAACGAACTGTGGCTAATATCAATTTGATGACTGATTTTGGAGTATGTGATTCTACCATCGCTAGATTGCTTCAAACAAGGTCAAGGTCATCTATATTTGGTTCAACTGATTTAATTAAGTCATTGGAGGAAGTTAAAGGTTTAGGGTTTTGTCCTTCAACGACTAATTTTGGGATTGCTTTGATAGGCAAGAAAGGTTTGGGTGAAAGACTTTGGAATGAGAAAGTTAATGCCTTTAAGAAATGgggttggtctgatgaagatgttCTAAAAGCATTTAGAAAGAAGCCTTATTGTATGTCAACATCcattgataaaattaatttagtgaTGAGCTTTTGGGTCAATCAGTTGGGTTGGGATGCTATGGCCATTGCTAAATCACCGTATGTTTTGTCGTTAAGTTTGGAAAAAACGATCATTCCGAGAGCCGCAGTTGTGCAATATCTTCTTAGTAAAGGTTTGAGGAATAAGAATGCAAGCTTAACTTGTCCATTTGTAATACGGGAGAAGTTGTTTCTTGATATGCTTAAAAAACGTTTTAAGGATGAGTATTCTTATCTTTTAAAGTTGTATGAAGAAAAACTCAATCTTGCGAATACCAGGGACAAGACACGATGA 1206 0.3367 MFRKWFLSQNLLLGINRTPKFHPFIQQFLFPFSPSRFCNTTTTTTSESESESDTHPFAVSYLINNFGFSTQSALKAFNQNQVRFKSPDKPNSVFTFFKDHHFSESNILIIIRKSPWLLSAEPHKNLLPKFQFFLSKGVSSSDIVPLLTANPRILQSSLEKRTIPLFELLTRFLKSNKDVIVCLIRHWMSFALYPYQRTVANINLMTDFGVCDSTIARLLQTRSRSSIFGSTDLIKSLEEVKGLGFCPSTTNFGIALIGKKGLGERLWNEKVNAFKKWGWSDEDVLKAFRKKPYCMSTSIDKINLVMSFWVNQLGWDAMAIAKSPYVLSLSLEKTIIPRAAVVQYLLSKGLRNKNASLTCPFVIREKLFLDMLKKRFKDEYSYLLKLYEEKLNLANTRDKTR 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01930 401 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 39 395 - -
Tsu07g01930 401 Pfam mTERF 265 364 IPR003690 GO:0003690|GO:0006355
Tsu07g01930 401 Pfam mTERF 96 234 IPR003690 GO:0003690|GO:0006355
Tsu07g01930 401 PANTHER CGI-12 PROTEIN-RELATED 39 395 IPR003690 GO:0003690|GO:0006355
Tsu07g01930 401 SMART mt_12 144 175 IPR003690 GO:0003690|GO:0006355
Tsu07g01930 401 SMART mt_12 285 316 IPR003690 GO:0003690|GO:0006355
Tsu07g01930 401 SMART mt_12 317 351 IPR003690 GO:0003690|GO:0006355
Tsu07g01930 401 SMART mt_12 216 246 IPR003690 GO:0003690|GO:0006355
Tsu07g01930 401 SMART mt_12 108 139 IPR003690 GO:0003690|GO:0006355
Tsu07g01930 401 Gene3D Transcription termination factor 3, mitochondrial 160 386 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01930 Tsu-Chr7 19628007 19629647 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu07g01930 mTERF 4.6e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01930 K15032 - gmx:102663414 331.643