Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01929 ATGTTGAAATGGTTTCTATGCAGAAATAATGTTGTTTTAGGGTTCATCACAACAAACCCTAAATTGGATCACTTTTCATTCCCAATTTCACTCAGATCATTCAGATACTGCACAACCACTGCATCACAATCAGATACACACCCATTTGCTGTATCATACCTCATCAACAATTTCGGTTTCTCACCTCAATCAGCTCTCACAGCTTTCAACAACAAACAGGTTCGTTTCGAATCACCAGAAAATCCTAATTTAGTTATCAACTTCTTCAAAAACCATCATTTTTCACACTCCAACATATGCATCATCATTACAAAAGCACCATGGTTACTTTCATCACAACCCAACAAAAGGTTATTgccaaagtttcaattttttctatccAAAGGTGTTTCTTCCTCTGATATTGTTtcattgttaactgcatacCCTGCAATTTTACAATTTAGCTTGGAGAAACGAATAATCCCTCTTTTTGAATTATTAAGTAGGTTCTTGAAAACCAACAAGGATGTCATTGTTTGCTTAATTCGACATTCATTTGCTCGTACTCCATACGACCTTATTGTGGCTAATGTCAATTTGATGACTGATTTTGGAGTTTGTGATTCTGCCATTGCTACATTGCTTCAAAGAGGGCCATCTATACTTGGTTCAAATGATTTGATTAAGACATTGGAGGAAGTTAAGGGTTTAGGGTTTCATCCTTCAACAACTACTTTTGGGACTGCTTTGATGGCCAAgaaatatatgagtaaaaaacTTTGGAATCAGAAAGTTGACGTCTTTAAGAAATGGGGTTGGTCTAATGAAGCTGTTTTTCAAGCATTTAGGTCATATCCTGGTTTAATGTTGGTTTCAATTGATAAGGTTAATTTGGTGATGAGATTTTGGGTCAATCAATTGGGTTGGAATTCCTTGGCACTTACTAAAATGCCAAAAATGTTTGGTTATAGTTTACATAAAAGGACCATTCCAAGGGCCTCAGTTTTGCAATTTCTTTTGATGAAAGGCTTGCGAGAAAATAACGCAAGCTTAGTCAAACCATTTACTTATACTGAGAAATTGTTCTTGAGCAAGTTTGTTTTCAGCTTTAAGGAGGAGTCTGATTATCTATTAAAGCTATATGAGGACAAAATGGAACTTGCATACACAAAAGAAAACAATGACATGCCTAGCTGA 1179 0.3401 MLKWFLCRNNVVLGFITTNPKLDHFSFPISLRSFRYCTTTASQSDTHPFAVSYLINNFGFSPQSALTAFNNKQVRFESPENPNLVINFFKNHHFSHSNICIIITKAPWLLSSQPNKRLLPKFQFFLSKGVSSSDIVSLLTAYPAILQFSLEKRIIPLFELLSRFLKTNKDVIVCLIRHSFARTPYDLIVANVNLMTDFGVCDSAIATLLQRGPSILGSNDLIKTLEEVKGLGFHPSTTTFGTALMAKKYMSKKLWNQKVDVFKKWGWSNEAVFQAFRSYPGLMLVSIDKVNLVMRFWVNQLGWNSLALTKMPKMFGYSLHKRTIPRASVLQFLLMKGLRENNASLVKPFTYTEKLFLSKFVFSFKEESDYLLKLYEDKMELAYTKENNDMPS 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01929 392 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 15 384 - -
Tsu07g01929 392 Pfam mTERF 189 356 IPR003690 GO:0003690|GO:0006355
Tsu07g01929 392 Pfam mTERF 86 217 IPR003690 GO:0003690|GO:0006355
Tsu07g01929 392 Gene3D Transcription termination factor 3, mitochondrial 54 181 IPR038538 -
Tsu07g01929 392 Gene3D Transcription termination factor 3, mitochondrial 182 373 IPR038538 -
Tsu07g01929 392 SMART mt_12 273 304 IPR003690 GO:0003690|GO:0006355
Tsu07g01929 392 SMART mt_12 136 167 IPR003690 GO:0003690|GO:0006355
Tsu07g01929 392 SMART mt_12 305 339 IPR003690 GO:0003690|GO:0006355
Tsu07g01929 392 SMART mt_12 206 234 IPR003690 GO:0003690|GO:0006355
Tsu07g01929 392 SMART mt_12 100 131 IPR003690 GO:0003690|GO:0006355
Tsu07g01929 392 PANTHER CGI-12 PROTEIN-RELATED 15 384 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01929 Tsu-Chr7 19622882 19624060 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu07g01929 mTERF 5.8e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01929 K15032 - gmx:102663414 330.872