Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01928 ATGTTGAAATTGTTTCTATGCAGAAATAATGTTGTTTTAGGGTTCATCACAACAAACCCTAAATTGGATCACTTTTCATTCCCAATTTCACTCAGATCATTCAGATACTGCACAACCACTGCATCACAATCAGATACACACCCATTTGCTGTATCATACCTCATCAACAATTTCGGTTTCTCACCTCAATCAGCTCTCACAGCTTTCAACAACAAACAGGTTCGTTTCAAATCTTCAGATAAGCCTAATTCAGTTATCAACTTCTtcaaaaatcatcatttttcaCACTCCAACATACGCATCATCATTACAAAAGCACCATGGTTACTTTCATCACAACCCAACAATGCAATTTTACcgaagtttgaattttttctatcaaaaggTGCTTCTTCCTCTGATATTGTTTCATTGTTAACTGCAAACCCTACAATTTTACAACGTAGCTTGGAGAAACAAATAATCCCTGTTTTTGAATTATTACGTAGGTTCTTTAAAACCGACAAGGATGCCATTGTTTGCTTAATTCGACATTGGTATTCGTTTTCTCATAATCCCTATAACCTTATTGTCACTAATATCAATTTGATGACTGATTTTGGAGTATGCAATTATACCATAACTAGATTGCTTCAAACAAGGCCATCTATATTTGTTTCAACTGATTTGATTAAGTCATTGGAGGAAGTTAAGGGTTTAGGGTTTAATCCTTCAATGACTACTTTTGGGGCTGCTTTGATGGCCAAGAAATGTATGAGTAGAGAACTTTGGAATCAGAAAGTTGATGTCTTTAAGAAATGGGGTTGGTCTGTTGAAGCTGTTTTTCAAGCATTTAGGTCGCGCCCTAATTTGATGTTGGTTTCAATTGATAAGGTTAATTTGGTGATGAGTTTTTGGGTCAATCAATTGCATTGGAATTCCTTCGCACTTACTAAATTGCCAAATATGTTTACTTATAGTTTACATAAAAGGATCATTCCAAGGGCCTCAGTTTTGCAATATCTTTTGATGAATGGTCTGCGAAAAAAGAATGCAAGCTTAGTTCACCCATTTAGCCTACTACAACGCGGGAAACCAAATCTTTTTAGGATCCACGTTGATGTTACACTCGATGATCTGAAACACCAATCGACCCAACTCAACCGCCATTTCCACTTTCGCGATCAAAGAAGGGTGACTGACGTCGAGTATCACCGTCTGTCGATTTGCTCAAACAGAACAGTGTTGTTCATCAACATGAAGCTTCAGAATGACGACGATGCGAGAACAATGTTCTCTATTTTTTCTCGGTACATCACAAAGGGACCGATCGAGATAGACGCTAAGTTGGTTTGA 1335 0.3625 MLKLFLCRNNVVLGFITTNPKLDHFSFPISLRSFRYCTTTASQSDTHPFAVSYLINNFGFSPQSALTAFNNKQVRFKSSDKPNSVINFFKNHHFSHSNIRIIITKAPWLLSSQPNNAILPKFEFFLSKGASSSDIVSLLTANPTILQRSLEKQIIPVFELLRRFFKTDKDAIVCLIRHWYSFSHNPYNLIVTNINLMTDFGVCNYTITRLLQTRPSIFVSTDLIKSLEEVKGLGFNPSMTTFGAALMAKKCMSRELWNQKVDVFKKWGWSVEAVFQAFRSRPNLMLVSIDKVNLVMSFWVNQLHWNSFALTKLPNMFTYSLHKRIIPRASVLQYLLMNGLRKKNASLVHPFSLLQRGKPNLFRIHVDVTLDDLKHQSTQLNRHFHFRDQRRVTDVEYHRLSICSNRTVLFINMKLQNDDDARTMFSIFSRYITKGPIEIDAKLV 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01928 444 Pfam mTERF 86 284 IPR003690 GO:0003690|GO:0006355
Tsu07g01928 444 Pfam mTERF 252 341 IPR003690 GO:0003690|GO:0006355
Tsu07g01928 444 Gene3D Transcription termination factor 3, mitochondrial 167 356 IPR038538 -
Tsu07g01928 444 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 16 354 - -
Tsu07g01928 444 SMART mt_12 208 236 IPR003690 GO:0003690|GO:0006355
Tsu07g01928 444 SMART mt_12 100 131 IPR003690 GO:0003690|GO:0006355
Tsu07g01928 444 SMART mt_12 136 167 IPR003690 GO:0003690|GO:0006355
Tsu07g01928 444 SMART mt_12 307 341 IPR003690 GO:0003690|GO:0006355
Tsu07g01928 444 SMART mt_12 275 306 IPR003690 GO:0003690|GO:0006355
Tsu07g01928 444 PANTHER CGI-12 PROTEIN-RELATED 16 354 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01928 Tsu-Chr7 19606544 19609327 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu07g01928 mTERF 7.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01928 K15032 - gmx:102663414 301.212