Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01925 ATGTTGAAATTGTTTCTATGCAGACAGAATGTTGTTTTAGGGTTTATCACAACAAACCCTAAATTGGATCACTTTTCATTCCCAATTTCACTCAGATTCTTAACCACAACCACAGCATCACAATCAGACACACACCCATTTCCAGTTTCCTACCTCATCAACAATTTCGGTTTCTCAACTCAATCAGCTCTCACAGCTTTCAACGGCAATCAGAAAAGCACCATGGTTACTTTCATCACAACCCAACAAAAGAGTATTGCCAAAGTTTCAATTCTTTCTATCAAAAGATTGCTTCAAACAAGGTCAAGGTCATCTATATTTGGTTCAACTGATTTGATTAAGTCATTGGAGGAAGTTAAAGGTTTAGGGTTTCGTCCTTCAACGACTACTTTTGGGATTGCTTTGATAGGCAAGAAAGGTTTGGGTGAAAGACTTTGGAATGAGAAAGTTAATGCCTTTAAGAAATGgggttggtctgatgaagatgttCTAGAAGCATTTAGAAAGAAGCCTTATTGTATGTCAACATCcattgataaaattaatttagtgaTGAGCTTTTGGGTCAATCAATTGCATTGGAATTCCTTGGCACTTACTAAATTGCCAAATATGTTTGGTTATAGTTTACATAAAAGGATCATTCCAAGGGCCTCAGTTTTGCAATATCTTTTGATGAAAGGTTTGCGAAAAAAGAATGCGAGCTTAGTTACGCCATTTTGTTATAATGAGAAATTGTTCTTGAGCAAGTTTGTTTTCAGCTTTAAGGGAGAGTCTGATTATCTATTAAAGCTCTATGAGGAAAAAATGAAACTTGCATATACAGAGGAAAACAATGGCATGCCACTCACTAAATAG 858 0.3427 MLKLFLCRQNVVLGFITTNPKLDHFSFPISLRFLTTTTASQSDTHPFPVSYLINNFGFSTQSALTAFNGNQKSTMVTFITTQQKSIAKVSILSIKRLLQTRSRSSIFGSTDLIKSLEEVKGLGFRPSTTTFGIALIGKKGLGERLWNEKVNAFKKWGWSDEDVLEAFRKKPYCMSTSIDKINLVMSFWVNQLHWNSLALTKLPNMFGYSLHKRIIPRASVLQYLLMKGLRKKNASLVTPFCYNEKLFLSKFVFSFKGESDYLLKLYEEKMKLAYTEENNGMPLTK 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01925 285 Gene3D Transcription termination factor 3, mitochondrial 42 258 IPR038538 -
Tsu07g01925 285 SMART mt_12 196 230 IPR003690 GO:0003690|GO:0006355
Tsu07g01925 285 SMART mt_12 95 125 IPR003690 GO:0003690|GO:0006355
Tsu07g01925 285 SMART mt_12 164 195 IPR003690 GO:0003690|GO:0006355
Tsu07g01925 285 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 89 275 - -
Tsu07g01925 285 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 15 82 - -
Tsu07g01925 285 PANTHER CGI-12 PROTEIN-RELATED 89 275 IPR003690 GO:0003690|GO:0006355
Tsu07g01925 285 PANTHER CGI-12 PROTEIN-RELATED 15 82 IPR003690 GO:0003690|GO:0006355
Tsu07g01925 285 Pfam mTERF 144 247 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01925 Tsu-Chr7 19585662 19586852 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu07g01925 mTERF 6.5e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01925 K15032 - gmx:102661928 209.149