Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01924 ATGGAGCTTGGATCAGTGGTTGAAGCAGTTTCTGCGGATGTTGGTGCTGGCGGTGACGCTCCTCTTTACAACATTGAAAGCTTTGAAAGCCTATGCATGCATTGTGGTCAAAACGGCACTACAAATTCCTTCATCACTCTCATTCCTCACTTCAAAAAGATTTGGTTGTCTGCTTTTGATTGTCCTCACTGTGGTGACAAGAACAATGAAGTAATGTTTGTTGGCGATATTCCACCGCACTGTTGCTGTTACACGCTGAAGATCCCATCCGGAAATTCAGAGATGCTCAATAGGCAAGTGGTGAAATCAGAACATGCTACCATTAAGATACCAGAATTGGATTTTGAGATTCAATCAGAGGCTCGGTGTGGTAGTCTATCAACGGTAGAAGGGATACTGATGCGAGCTGCTGATGACCTTCAAGCCCTTCAAGAGGAGCGCAAAAAAGTAGCTCCAGAGACAGCTGAAGCAATCGATCAATTTTTGGTAAAATTGCGAGCATGTGCAACAGGAGAATCATCATTTACATTTATTCTTGATGATCCTGCTGGAAATAGCTTCATTGAAAACCCGTTTGCACCATCATCTGATCCATCACTAACAATCAAGTTTTACGATCGAACTCCTGAGAAACAAGCATTATTGGGATATCAAGTGAGGGGAGAACCACACGGGTCAGTAGGGGCAGAAGCAGGTCACAGAGCCATTGCACAGAGTAACAGTGCAGAAATTGCAGAAGCCTTATTTCGATATACTGCACCAGAAGAGGTGTATGCTTTCCCGGTAACTTGTGGTTGTGGTAGTGGATGTGAAACTCGAATGTTTCCAATTGATATTCCGTACTTCCAAGAAGCAATTGTTATGGCATCCACTTGCGATGCTTGTGGTTACCGCAGCTCTGAGTTGAAAGCTGGTGGAGAAGtttcaaaaaaaggaaaaagcatTACTCTTTCTGTGCAAAACGTTAAAGACCTAAGCCGTGATGTAATAAAGTCTGATACCGCAAGTGTAAAAATTCCTGAACTCGACTTCGAGCTGGCAAGTTGCAGTCGCACTATTGGAGGAGTTGTTACAACTGTTGAAGgtttaattacaaaaattagTGAAAGCCTTGAGAGGATCCATGGGTTTACTTTCGGAGATAGTCTTGAGGAACATAGCAGAAGCAAGTGGTTGGACTTTGAGGACAGGCTAAACAAGATTCTTAGCTTGGAAACACCTTGGACTTTAATTCTTGATGATGCATTAGCATGCTCATTTATAGCACCTGCAACTGATAATATCGAAGATGACAAACAGTTAATGTATGAGGAATATGAGAGGACATGGGAGCAAGAGGAAGAATTAGGTCTGCATCAGATGGACACCACTTCTGCCGATGCTGCTTATGAATCATAA 1398 0.4206 MELGSVVEAVSADVGAGGDAPLYNIESFESLCMHCGQNGTTNSFITLIPHFKKIWLSAFDCPHCGDKNNEVMFVGDIPPHCCCYTLKIPSGNSEMLNRQVVKSEHATIKIPELDFEIQSEARCGSLSTVEGILMRAADDLQALQEERKKVAPETAEAIDQFLVKLRACATGESSFTFILDDPAGNSFIENPFAPSSDPSLTIKFYDRTPEKQALLGYQVRGEPHGSVGAEAGHRAIAQSNSAEIAEALFRYTAPEEVYAFPVTCGCGSGCETRMFPIDIPYFQEAIVMASTCDACGYRSSELKAGGEVSKKGKSITLSVQNVKDLSRDVIKSDTASVKIPELDFELASCSRTIGGVVTTVEGLITKISESLERIHGFTFGDSLEEHSRSKWLDFEDRLNKILSLETPWTLILDDALACSFIAPATDNIEDDKQLMYEEYERTWEQEEELGLHQMDTTSADAAYES 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01924 465 PANTHER ZINC FINGER PROTEIN ZPR1 3 464 IPR040141 -
Tsu07g01924 465 Gene3D ZPR1, zinc finger domain 23 75 IPR042452 -
Tsu07g01924 465 Gene3D ZPR1, zinc finger domain 256 305 IPR042452 -
Tsu07g01924 465 Coils Coil 126 146 - -
Tsu07g01924 465 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 265 454 IPR004457 GO:0008270
Tsu07g01924 465 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 32 210 IPR004457 GO:0008270
Tsu07g01924 465 Gene3D ZPR1, A/B domain 76 217 IPR042451 -
Tsu07g01924 465 Gene3D ZPR1, A/B domain 307 451 IPR042451 -
Tsu07g01924 465 SMART zpr1 262 423 IPR004457 GO:0008270
Tsu07g01924 465 SMART zpr1 30 190 IPR004457 GO:0008270
Tsu07g01924 465 PANTHER ZINC FINGER PROTEIN ZPR1-RELATED 3 464 - -
Tsu07g01924 465 Pfam ZPR1 zinc-finger domain 265 421 IPR004457 GO:0008270
Tsu07g01924 465 Pfam ZPR1 zinc-finger domain 30 189 IPR004457 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01924 Tsu-Chr7 19576069 19582294 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01924 1 465 C2H2 Transcription Factor Family AT5G22480 66.804 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01924 K06874 - gmx:100814878 686.411