Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01923 ATGACTGATTTTGGAGTTTGTGATTCTAACATTGCTAAATTGCTTAAAACAAGGCCATCTATATTTGGTTCAACTGATTTGATTAAGTCATTGGAGGAAGTTAAGGGTTTAGGGTTTGATCCTTCAATGAATACTTTTGGGGTTGCTTTGATGGCCAAGAAATGTTTAAGTAAAAAACTTTGGGATGAGAAAGTTGATACCTTTAAGAAATGGGGTTGGTCTGATGAAGCTGTTTTTCAAGCATTTAGGTCGCGCCCTAGTTTGATGTTGGTTTCAATTGATAAGGATAATTTGGTGATGAGTTTTTGGGTCAATCAATTGGGTTGGAATTCCTTGACACTTACTAAATGTCCACTTATGTTTACTTATAGTTTGGAGAAAAGGATCATCCCAAGGGCCTCAGTTCTGCAATTTCTTCTGATGAAAGGTTTGAGAAAAAAGAATGCAAGCTTAGTTACACCATTTACTTATTCTGAGAAGTTGTTCTTGAGCAAGTTTGTTTTTAGCTTTAAGGAGGAGTCTGATTATCTATTAAAGCTATATGACGAAAAAATGAAACTTGCAAAGACAAAGGAGAAAAATGGCATGCCATCCACCAATCTTGTTCTTTGA 612 0.3546 MTDFGVCDSNIAKLLKTRPSIFGSTDLIKSLEEVKGLGFDPSMNTFGVALMAKKCLSKKLWDEKVDTFKKWGWSDEAVFQAFRSRPSLMLVSIDKDNLVMSFWVNQLGWNSLTLTKCPLMFTYSLEKRIIPRASVLQFLLMKGLRKKNASLVTPFTYSEKLFLSKFVFSFKEESDYLLKLYDEKMKLAKTKEKNGMPSTNLVL 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01923 203 Gene3D Transcription termination factor 3, mitochondrial 1 179 IPR038538 -
Tsu07g01923 203 SMART mt_12 12 40 IPR003690 GO:0003690|GO:0006355
Tsu07g01923 203 SMART mt_12 111 145 IPR003690 GO:0003690|GO:0006355
Tsu07g01923 203 Pfam mTERF 2 162 IPR003690 GO:0003690|GO:0006355
Tsu07g01923 203 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 1 190 - -
Tsu07g01923 203 PANTHER CGI-12 PROTEIN-RELATED 1 190 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01923 Tsu-Chr7 19566134 19566745 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu07g01923 mTERF 3.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01923 K15032 - gmx:102661928 212.616