Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01919 ATGTTCCAAGCAATGTCGAAATTGTTTCTATGCCCACGGAATGTTGTTTTAGGGTTAATCACAACAAACCCTAAATTTGATCCTCTTTCTCAAAAACACTCTTCATTCCCAAATTCATTCAGATTCAGATACTGCACCACCACCACAGCAACAACATCAATAACAGCATCAGAATCAATATCAGAGACACAACCATTCGCTGTATCATACCTCATCAACAATTTCGATTTCTCACCTCAATCAGCTCTCAAAGCTTTCAAACACAGAAAAGTTAGTTTCAATACCATAGAAAAACCTAATTTAGTTATCAAATTCTTTATAAACAATGGATTTTCACACTCCGACATACGCATCATCATCAGACAATCACCATGGTTACTTTCATCACATCCCCACAACACTTTATTgccaaagtttcaattttttctctcaaaaggtGTTTCTTCATCTGATATTGTTCCATTGTTAATTGCAAACCCTACAATTTTACAAAGTAGCTTGGAGAAACGAATAATCCCTCTTTTTGAATTATTAAGTAGGTTCTTTAAAACCAATAGGGATGTCATTGTGTacttaattcaaaattttaatcgCACTCCATATGGAGATGCGTCTGGATTTGCTCTTCATCCCTATCATCGTATTGTGGCTAATATCAATTTGATGTCTGAATTTGGAGTATGTGATTCTGCCATGGTTAGATTGTTTCAAACAAGGCCAtgtatatttggttcaaatgaGTTGATTAAGTCATTGGAGGAAGTTAAGGGTTTAGGGTTTGATCCTTCGACAACTACTTTTTTGACTGCTTTGATAGCCAAGAAATGTAAACTTTGGAATCAGAAAGTTGATGTCTTTAAGAAATGGGGTTGGTCTGATGAAGCTGTTTTTCAAACATTTAGGTCATATCCTAATTTGATGTTGTTTTCAATTGATAAGGTTAATTTGGTGATGAGTTTTTGGGTCAATCAATTGGGTTGGAATTCCTTGGAACTTACTAAATTTCCAAATATGTTTGGTTATAGTTTACATAAAAGGATTATTCCAAGGGCCTCAGTTTTGCAATATGTTTTGATGAAAGGTTTGCGAAAAAAGAATGCGAGCTTAGTTACGCCATTTTGTTATAATGAGAAATTGTTCTTGAGCAAGTTTGTTTTCAGCTTTAAGGGAGAGTCTGATTATCTATTAAAGCTATATGAGGAAAAAATGAAACTTGCATACTCAGAGGAAAACAATGGCATGCCACTCACTAAATAG 1257 0.3302 MFQAMSKLFLCPRNVVLGLITTNPKFDPLSQKHSSFPNSFRFRYCTTTTATTSITASESISETQPFAVSYLINNFDFSPQSALKAFKHRKVSFNTIEKPNLVIKFFINNGFSHSDIRIIIRQSPWLLSSHPHNTLLPKFQFFLSKGVSSSDIVPLLIANPTILQSSLEKRIIPLFELLSRFFKTNRDVIVYLIQNFNRTPYGDASGFALHPYHRIVANINLMSEFGVCDSAMVRLFQTRPCIFGSNELIKSLEEVKGLGFDPSTTTFLTALIAKKCKLWNQKVDVFKKWGWSDEAVFQTFRSYPNLMLFSIDKVNLVMSFWVNQLGWNSLELTKFPNMFGYSLHKRIIPRASVLQYVLMKGLRKKNASLVTPFCYNEKLFLSKFVFSFKGESDYLLKLYEEKMKLAYSEENNGMPLTK 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01919 418 Gene3D Transcription termination factor 3, mitochondrial 73 199 IPR038538 -
Tsu07g01919 418 Gene3D Transcription termination factor 3, mitochondrial 204 391 IPR038538 -
Tsu07g01919 418 PANTHER CGI-12 PROTEIN-RELATED 50 408 IPR003690 GO:0003690|GO:0006355
Tsu07g01919 418 SMART mt_12 153 184 IPR003690 GO:0003690|GO:0006355
Tsu07g01919 418 SMART mt_12 233 261 IPR003690 GO:0003690|GO:0006355
Tsu07g01919 418 SMART mt_12 297 328 IPR003690 GO:0003690|GO:0006355
Tsu07g01919 418 SMART mt_12 329 363 IPR003690 GO:0003690|GO:0006355
Tsu07g01919 418 SMART mt_12 117 148 IPR003690 GO:0003690|GO:0006355
Tsu07g01919 418 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 50 408 - -
Tsu07g01919 418 Pfam mTERF 104 194 IPR003690 GO:0003690|GO:0006355
Tsu07g01919 418 Pfam mTERF 215 380 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01919 Tsu-Chr7 19485050 19486306 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu07g01919 mTERF 4.7e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01919 K15032 - gmx:102663414 298.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01919 07 19485050 19486306 Tsu07g01919 07 19485050 19486306 ECH