Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01915 ATGTCAAAATGGTTTCTAGGGTTTATCATCACAAGAAAATCTACAATTTCTCAAAAACACTTTTCATTCCCAATTTCACTCAGATCATTCAGATACTGCACAACCACAGCAACACACCCATTTCCAGTATCATATCTCATCAACAATTTCGGTTTCTCAACACAATCAGCTCTCACAGCTTTCAACAACAAACAGGTTCGTTTCATATCTCCAGATAAGCCTAATTCTGTTATCAACTTCTtcaaaaatcatcatttttcaGACTCCAACATACGCATCATCATTACAAAAGCACCATGGTTACTTTCATCACAACCCAACAAAAGGTTATTGCCgaagtttcaattttttctatccAATGGTGCTTCTTCCTCTGATATTGTTTCATTGTTAACTGAAAACCCTATAATTTTGCGAAGTAGCTTGGAGAAACGAATAATCCCTCTTTTTGAATTATTAAGCAGGTTCTTCAAAACCAACAAGGATGCCATTGTTTGCTTACTTCTATATTCGAATGCATTTTCTCGTAATCCCTATCACCTTATTGTGGCTAATATCAATTTGATGACTGATTTTGGAGTTTGTGATTCTGCCATCGTTAGATTGTTTCAAAATAGGACATCtatatttggttcaaatgaTTTGATTAAGACATTGGAGGAAGTTAAGGGTTTAGGGTTTGATCCTTCCACAACTACTTTTGTGACTGCTTTGATGACCAAGAAATGTATGAGTAAAAAACTTTGGAATCAGAAATTTGATGTCTTTAAGAAATGGGGTTGGTCTAATGAAGCTGTTTTTCAAGCATTTAGGTCATATCCTGGTTTAATGTTTGTTTCAATTGATAAGGTTAATTTGGTGATGAGTTTTTGGGTCAATCAATTGGGTTGGAATTCCTTGGCACTTACTAAAATGCCAAAAATGTTTGGTTATAGTTTACATAAAAGGACCATTCCAAGAGCCTCAGTTTTGCAATTTCTTTTGATGAAAGGTTTGCGAGAAAATAACGCAAGCTTAGTCAAACCATTTACTTATACTGAGAAATTGTTCTTGAGCAAGTTTGTTTTCAGCTTTAAGGAGGAGTCTGATTATCTATTAAAGCTATATGAGGACAAAATGGAACTTGCATACACAAAAGAAAACAATGGCATGCCTAGCtga 1161 0.3333 MSKWFLGFIITRKSTISQKHFSFPISLRSFRYCTTTATHPFPVSYLINNFGFSTQSALTAFNNKQVRFISPDKPNSVINFFKNHHFSDSNIRIIITKAPWLLSSQPNKRLLPKFQFFLSNGASSSDIVSLLTENPIILRSSLEKRIIPLFELLSRFFKTNKDAIVCLLLYSNAFSRNPYHLIVANINLMTDFGVCDSAIVRLFQNRTSIFGSNDLIKTLEEVKGLGFDPSTTTFVTALMTKKCMSKKLWNQKFDVFKKWGWSNEAVFQAFRSYPGLMFVSIDKVNLVMSFWVNQLGWNSLALTKMPKMFGYSLHKRTIPRASVLQFLLMKGLRENNASLVKPFTYTEKLFLSKFVFSFKEESDYLLKLYEDKMELAYTKENNGMPS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01915 386 PANTHER CGI-12 PROTEIN-RELATED 15 378 IPR003690 GO:0003690|GO:0006355
Tsu07g01915 386 Gene3D Transcription termination factor 3, mitochondrial 158 367 IPR038538 -
Tsu07g01915 386 Pfam mTERF 78 274 IPR003690 GO:0003690|GO:0006355
Tsu07g01915 386 Pfam mTERF 245 350 IPR003690 GO:0003690|GO:0006355
Tsu07g01915 386 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 15 378 - -
Tsu07g01915 386 SMART mt_12 299 333 IPR003690 GO:0003690|GO:0006355
Tsu07g01915 386 SMART mt_12 200 228 IPR003690 GO:0003690|GO:0006355
Tsu07g01915 386 SMART mt_12 267 298 IPR003690 GO:0003690|GO:0006355
Tsu07g01915 386 SMART mt_12 128 159 IPR003690 GO:0003690|GO:0006355
Tsu07g01915 386 SMART mt_12 92 123 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01915 Tsu-Chr7 19396060 19397220 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu07g01915 mTERF 2e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01915 K15032 - gmx:102663414 327.02