Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01912 atGTTCCAAGCAATGTCGAAATCGTTTCTATGTCCACAGAATGTTGTTTTAGGGTTCATCACAACAAACCCTAAATTCGATCCTCTTTCTCAAAAACACTCTTCGTTCCCAAATTCACTCAGATTCAGATACTGCACCATCACAGCAACAACAGCATCAGAATCAAATTCAGAATCACAACCATTCGCTGTATCATACCTAATCAACAATTTTGGTTTCTCAACTGAATCAGCTCTCCAAGCTTTCAACAATAAACAGGTTCGTTTCAATAGCATAGAAAAGCCTAATTCAGTTATCAAATTCTTTAAAAACCATGGTTTTTCAGACTCCGACATACGCACCATCATCAGAAAAGAACCTTGGTTACTTTCATCGGAACCCCACAATGCAATTTTgtcaaagtttgaatttttccTATCCAAAGGTGTTTCTTCCTCTGATATTGTTtcattgttaactgcataccctgcaattttacaaaatggcTTGGAGAAACGAATAATCCCtctttttgtattatttagaAAGTTCTTGACAACCAACAAGGATGCCGTTGTTTGCTTAATTATACATTCAGATGTATTAGCTAAGTATCCCAATGACTTTATATTTTCGAATATCAATTTGATGAGTGATTTCGGAGTATGTGATTCTGCCATTGCTAATGTGCTTCAAAATAGGCCATCtatatttggttcaaatgaTTTGATTAAGTCATTGGAGGAAGTTAAGGGTTTAGGGTTTAATCCTTCAACGACTACTTTTGGGACTGCTTTGATGGCCAAGAAATGTAAACTTTGGAATCAGAAAGTTGATGTCTTTAAGAAATGgggttggtctgatgaagatctTTTTCAAACATTTAGGTCATATCCTAATTTGATGTTGTTTTCAATTGATAAGGTTAATTTGGTGATGAGTTTTTGGGTCAATCAATTGGGTTGGAATTCCTTGGAACTTGCTAAATTACCACATATGTTTGGTTATAGTTTACATAAAAGGATCATTCCAAGAGCCTCAGTTTTGCAATTTCTTTTGATGAAAGGTTTGCGAGAAGAGAATGCAAGTTTAGTTCACCCATTTGCTTATCCTGAAAAGTTGTTCTTGAGAAAGTTTGTTTTTAGCTTTGAGGCGGAGTCTGATTATCTATTAAAGCTATATGAGGAAAAAATGGAACTTGCATACACAGAGGAAAGCAATGACATGCCACTGACTAAATAG 1221 0.3227 MFQAMSKSFLCPQNVVLGFITTNPKFDPLSQKHSSFPNSLRFRYCTITATTASESNSESQPFAVSYLINNFGFSTESALQAFNNKQVRFNSIEKPNSVIKFFKNHGFSDSDIRTIIRKEPWLLSSEPHNAILSKFEFFLSKGVSSSDIVSLLTAYPAILQNGLEKRIIPLFVLFRKFLTTNKDAVVCLIIHSDVLAKYPNDFIFSNINLMSDFGVCDSAIANVLQNRPSIFGSNDLIKSLEEVKGLGFNPSTTTFGTALMAKKCKLWNQKVDVFKKWGWSDEDLFQTFRSYPNLMLFSIDKVNLVMSFWVNQLGWNSLELAKLPHMFGYSLHKRIIPRASVLQFLLMKGLREENASLVHPFAYPEKLFLRKFVFSFEAESDYLLKLYEEKMELAYTEESNDMPLTK 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01912 406 Pfam mTERF 268 368 IPR003690 GO:0003690|GO:0006355
Tsu07g01912 406 Pfam mTERF 99 231 IPR003690 GO:0003690|GO:0006355
Tsu07g01912 406 PANTHER CGI-12 PROTEIN-RELATED 32 396 IPR003690 GO:0003690|GO:0006355
Tsu07g01912 406 SMART mt_12 285 316 IPR003690 GO:0003690|GO:0006355
Tsu07g01912 406 SMART mt_12 221 249 IPR003690 GO:0003690|GO:0006355
Tsu07g01912 406 SMART mt_12 113 144 IPR003690 GO:0003690|GO:0006355
Tsu07g01912 406 SMART mt_12 317 351 IPR003690 GO:0003690|GO:0006355
Tsu07g01912 406 SMART mt_12 149 180 IPR003690 GO:0003690|GO:0006355
Tsu07g01912 406 Gene3D Transcription termination factor 3, mitochondrial 163 380 IPR038538 -
Tsu07g01912 406 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 32 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01912 Tsu-Chr7 19316839 19319000 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu07g01912 mTERF 3.6e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01912 K15032 - gmx:102663414 310.071