Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01910 ATGCTTTCAACAACAAACAGATTGATTCTGACAGGACCATCTATACTTGGTTCAACTGATTTGATTCATACTTTGGAGGAAGTtaagggtttagggttttaTCCTTCAACTTCCACTTTTGTGGTAGCTTTGGTTGCAAAGAAATGTATGAGTAAAAAACTTTGGGATGAGAAAGTTGATACCTTTAAGAAATGgggttggtctgatgaagatatTGTGGAAGCATTTAGAAGGCAGCCTCACTGTATGTTAACATCCattgataaaattaattcaGTAATGAGCTTTTGGGTCGATCAGTTGGGTTGGGATGCTACGCTCATTGTCAAACGACCAAATGTTTTGGGGTCCAGTCTAGAGAGAAGGATCATACCAAGGTCCGCAGTACTGCAATATCTTCTGAAAAAAGGTTTACTAAAAAAGAAAGCTAGCATAACTATTGCAATCGTAGTCAGCGAAAAGTTGTTCCTTGAAAGATGTATAAACTGTTATAAGGAAGAGTCATCTTATCTATTAAAGCTTTATGCAGAAAAACTAAATGTTGCACACGCCAGCGACAAAACTGACTTGATATGA 576 0.342 MLSTTNRLILTGPSILGSTDLIHTLEEVKGLGFYPSTSTFVVALVAKKCMSKKLWDEKVDTFKKWGWSDEDIVEAFRRQPHCMLTSIDKINSVMSFWVDQLGWDATLIVKRPNVLGSSLERRIIPRSAVLQYLLKKGLLKKKASITIAIVVSEKLFLERCINCYKEESSYLLKLYAEKLNVAHASDKTDLI 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01910 191 PANTHER CGI-12 PROTEIN-RELATED 4 183 IPR003690 GO:0003690|GO:0006355
Tsu07g01910 191 Pfam mTERF 13 156 IPR003690 GO:0003690|GO:0006355
Tsu07g01910 191 Gene3D Transcription termination factor 3, mitochondrial 3 174 IPR038538 -
Tsu07g01910 191 SMART mt_12 6 34 IPR003690 GO:0003690|GO:0006355
Tsu07g01910 191 SMART mt_12 105 139 IPR003690 GO:0003690|GO:0006355
Tsu07g01910 191 SMART mt_12 73 104 IPR003690 GO:0003690|GO:0006355
Tsu07g01910 191 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 4 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01910 Tsu-Chr7 19301233 19302215 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu07g01910 mTERF 6e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01910 K15032 - gmx:102661928 211.846