Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01908 ATGCTTCGTTGCATCATCTTCAGTTCCAACCATtacaaaaccctaaacccccaAAAATCTTACCCTCTTTTCCCAATCCAATTTTCTCCCAAATTCAAACTCTGCACCACCTCTTCAGATTCCGATTCAGAATCAGACTCATTCACTGTCTCCTACCTCATCAACAACATCGGTTTCACTCGTGAAACTGCTCTCAAAGCTTCAAAACGAGTTCGTATCAAATCCCTAGAGAAACCCAATTCAGTTTTCACATTCTTCAGAAACTTCGGTTTTTCAGATACCAACATAAAGAAAATCTGCATAAAAGAACCATGGATTCTTGCTTCAGATACCCACAATTCAATTCTCCCAAAGATTGAATTTTTCCTATCCAAAGGTGCTTCAATTTCTGAAATTTCTCAGCTTTTAACTGTGAGTCCTAGAATTTTACAGTGTAGTTTGGAGAATCGAATTATCCCtctttttgaattttataagAGGATTTTGAAGTGTGATAAAGCTACAATTTGTTGCATGATTCGAAATTCGATTCTTTTGTCTAACAATCTTGCTCCTGTTAATGTTAAGTTGTTGATTGATTACGGAGTTTGTGATGCCAGTATTGTTAAATTGCTCTTGACAAGACCAACTATACTTGGTTCAACTGATTTGATTGATTCTTTGGAGGAAGTtaagggtttagggttttaCCCTTCAACTTCCACTTTTGGGATAGCTTTGGTTGCAAAGAAATGTATGAGTAAAACTCGGTGGAATGAGAAAGTTGATGCCTTTAAGAAATGgggttggtctgatgaagatgttgTGGAATCATTTAGGTTGCAGCCTAGTTTGATGTTGTCATCAGTTGATAAGATTAATTTGGTGATGAATTTTTGGGTCAATCAATTGGGTTGGAATTCTTTGGAACTTACTAGAAGGCCGCAAATTTTCGGTTTTAGTTTGCAGAAAAGGATTATTCCGAGGGCATTAGTTGTGCAATATCTTCAGATGAAAGGTTTGAGGAAAAAGTATGCAAGCTTAGTTACACCGTTTTTTTGGTCTGAGGAACTGTTCTTGCGCAAATATGTTTTCTGTTTTAAGGAAGAGTCTGATTATTTATTAAAGCTTTATGAGGAAAACATGAAACATGCATACACCAAGGAGAACATCGACATGCCATTCACCAAATAG 1173 0.3419 MLRCIIFSSNHYKTLNPQKSYPLFPIQFSPKFKLCTTSSDSDSESDSFTVSYLINNIGFTRETALKASKRVRIKSLEKPNSVFTFFRNFGFSDTNIKKICIKEPWILASDTHNSILPKIEFFLSKGASISEISQLLTVSPRILQCSLENRIIPLFEFYKRILKCDKATICCMIRNSILLSNNLAPVNVKLLIDYGVCDASIVKLLLTRPTILGSTDLIDSLEEVKGLGFYPSTSTFGIALVAKKCMSKTRWNEKVDAFKKWGWSDEDVVESFRLQPSLMLSSVDKINLVMNFWVNQLGWNSLELTRRPQIFGFSLQKRIIPRALVVQYLQMKGLRKKYASLVTPFFWSEELFLRKYVFCFKEESDYLLKLYEENMKHAYTKENIDMPFTK 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01908 390 Gene3D Transcription termination factor 3, mitochondrial 174 369 IPR038538 -
Tsu07g01908 390 PANTHER CGI-12 PROTEIN-RELATED 28 380 IPR003690 GO:0003690|GO:0006355
Tsu07g01908 390 Pfam mTERF 85 213 IPR003690 GO:0003690|GO:0006355
Tsu07g01908 390 Pfam mTERF 246 352 IPR003690 GO:0003690|GO:0006355
Tsu07g01908 390 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 28 380 - -
Tsu07g01908 390 SMART mt_12 202 230 IPR003690 GO:0003690|GO:0006355
Tsu07g01908 390 SMART mt_12 97 128 IPR003690 GO:0003690|GO:0006355
Tsu07g01908 390 SMART mt_12 133 165 IPR003690 GO:0003690|GO:0006355
Tsu07g01908 390 SMART mt_12 269 300 IPR003690 GO:0003690|GO:0006355
Tsu07g01908 390 SMART mt_12 301 335 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01908 Tsu-Chr7 19287631 19288992 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu07g01908 mTERF 1.7e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01908 K15032 - gmx:102667698 343.584