Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01907 ATGTTCAATACACCACCACCTTATCTATATCTCAAAAACCACTTAACTTTCCCTCTTATCATCCATCACTCTCCATCTCCATCTTGTTCTCTGCATTTTTCCAACAACAACACTTCTGATTCAACAACCTCAATTGCAGTCTCCTACCTCATCAAGACTTTTAACTTCACACCAAAATTTGCTTCCAAACTCTGCTCCACTTACGATATTCGTTTCAAAACTGCTCAAAACCCTGATTTAGTTCTCAACTTCTTTAGAAACAATGGTTTCTCAGAAACCCAATTACCTTCTATCATTACCAAGGCACCATGGTTACTTTCATGCAACCTCTCCTTAAGGGTCATcccaaagtttcaatttttactCTCCAAAGGCGCTTCTAAATCTGACATTGTTAACCTTGTTTGTAAGAATCCTATGGTCCTGTCTCCAAGTTTGGAGAATCATATAATCCCAACCTATGAATTGTTGTATAGATTCATGCAATCAGATAATGACACTATTCATCTTGTAATTCATAAACCATATGTACTTAGTTCTCATCTTGTGTCATATAACATCAAAATATTGGTTGATATTGGAGTGAAGGACTCAACTATGGTAAGATTGCTCGAGCTTCGGAGCACTACTCGGTTATTTCAGACAAATGAAATGCTGGAGATGGTGGAGGAATTAAAGAATTCAGGATTTACTACTTCAAAAACAACTTTTGTTATAGCATTGCTTGCTAGAGAAAACAAAGTAGCATGGAAAGAGAAAGTTGATTTATATAAGAAATGgggttggtctgatgaagatgtaAAAGAAGCATTTAAAAAACAGCCTCATTGTATGTCGGTAtctattaataaaattaatttagtgaTGGATTTTTGGGTCAATCAATTGGGTTGGGATGCTCGCGCCATTGCTAAAACACCGCATATTTTGTCGTTAAGTTTGGAAAAAAGAATCACTCCAAGGGCCCTCGTTGTGCAATTTCTGCAGGAGAAAGGTCTGCACAAGGAGAATGCAAGCTTAACTTATCCATTTGTAGTGTCTGAGAAGTTGTTTCGTGATGCGTATTTAAAACGTTATAAGGAGGAGTCTTCTTATCTATTAAAGCTGTATGAGGAAAAACTCAAACTTGCATACACCACCCACAAAAATGGCATGCGATGA 1161 0.3523 MFNTPPPYLYLKNHLTFPLIIHHSPSPSCSLHFSNNNTSDSTTSIAVSYLIKTFNFTPKFASKLCSTYDIRFKTAQNPDLVLNFFRNNGFSETQLPSIITKAPWLLSCNLSLRVIPKFQFLLSKGASKSDIVNLVCKNPMVLSPSLENHIIPTYELLYRFMQSDNDTIHLVIHKPYVLSSHLVSYNIKILVDIGVKDSTMVRLLELRSTTRLFQTNEMLEMVEELKNSGFTTSKTTFVIALLARENKVAWKEKVDLYKKWGWSDEDVKEAFKKQPHCMSVSINKINLVMDFWVNQLGWDARAIAKTPHILSLSLEKRITPRALVVQFLQEKGLHKENASLTYPFVVSEKLFRDAYLKRYKEESSYLLKLYEEKLKLAYTTHKNGMR 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01907 386 SMART mt_12 96 127 IPR003690 GO:0003690|GO:0006355
Tsu07g01907 386 SMART mt_12 268 299 IPR003690 GO:0003690|GO:0006355
Tsu07g01907 386 SMART mt_12 168 196 IPR003690 GO:0003690|GO:0006355
Tsu07g01907 386 SMART mt_12 300 334 IPR003690 GO:0003690|GO:0006355
Tsu07g01907 386 SMART mt_12 132 163 IPR003690 GO:0003690|GO:0006355
Tsu07g01907 386 PANTHER CGI-12 PROTEIN-RELATED 26 378 IPR003690 GO:0003690|GO:0006355
Tsu07g01907 386 Pfam mTERF 250 351 IPR003690 GO:0003690|GO:0006355
Tsu07g01907 386 Pfam mTERF 82 241 IPR003690 GO:0003690|GO:0006355
Tsu07g01907 386 Gene3D Transcription termination factor 3, mitochondrial 146 369 IPR038538 -
Tsu07g01907 386 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 26 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01907 Tsu-Chr7 19257519 19260634 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu07g01907 mTERF 2.7e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01907 K15032 - gmx:102663414 329.717