Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01895 ATGTTCAATACACCAACACCTTATCTATATCTCAAAAACCACTTAACTTTCCCTCTTATCATCCATCACTCTCCATCACCATCTTGTTCTCTGCATTTTCCCACCAACAACACTTCTGATTCAACAACCTCATTTGCAGTCTCCTACCTCATCAACAATTTTGACTTCACCCCACAATATGCTTCCAAACTCTGTTCCATTTACGAGATTCGTTTCCAGACTTCCGAAAAACCTGATTTAGTTCTCAACTTCTTTAGAAACAATGGTTTCTCAGAAACCCAATTATGTTCTATCATTTCCAAGGCACCAAGTAAGTACCCTAGGCTCCTGTATTCAAGCCTGGAGAATCATATCGTCCCGACATATGAATTGCTGTATAGATTCTTGCAATCACACACAATTGCCTGTGCAATTTACTATCCAAAAATACTTATCGACTATCGTGTGCCAGGTAACATCAGATTGCTCATTGAGATTGGAGTGCCCAACCCAAACATTGTAAGATTGCTTCAGAAGCAGTCTCGGGGATTGAATATGAATACTCATTGCATGCTGAAGTTGGTGGAGGAATTGAAGGATTTGGGTTTTAATCCTTCAAAAACAACCTTTGGTAGAGCATTGGAAGCCAAACTATCTGTAAACAAAACATTGTGGAAAAAGAAAGTCGATGCCTTTAAGAAATGGGGCTGGTCTAATGAAGATATTGTGGAAGCATTTAGAAAGCGTCCTAATTTTATGGTAACATCcattgataaaattaatttagtgaTGGACTTTTGGGTCAATCAGTTGGGTTGGGATGCTCTCGCCGTTGGCACAATACCATGGGTTATTGAGTATAGTCTGGAGAGAAGGATCATTCCTAGGGCCCAAGTAGTGCAATTTCTGCTGAAGAAAGGCCTGCGAGAAAAGAATACAAACTTAACTACTCCATTTAAACTCAGCGATAAGTTGTTCCTTCATAGATATATAAAACGTTATAAGGAGGAGTCATCTTATCTATTAAAGCTTTATGAGGAAAAACTGACTCTTAAGGACAAAACTGACATGTCATGA 1056 0.3835 MFNTPTPYLYLKNHLTFPLIIHHSPSPSCSLHFPTNNTSDSTTSFAVSYLINNFDFTPQYASKLCSIYEIRFQTSEKPDLVLNFFRNNGFSETQLCSIISKAPSKYPRLLYSSLENHIVPTYELLYRFLQSHTIACAIYYPKILIDYRVPGNIRLLIEIGVPNPNIVRLLQKQSRGLNMNTHCMLKLVEELKDLGFNPSKTTFGRALEAKLSVNKTLWKKKVDAFKKWGWSNEDIVEAFRKRPNFMVTSIDKINLVMDFWVNQLGWDALAVGTIPWVIEYSLERRIIPRAQVVQFLLKKGLREKNTNLTTPFKLSDKLFLHRYIKRYKEESSYLLKLYEEKLTLKDKTDMS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01895 351 PANTHER CGI-12 PROTEIN-RELATED 22 103 IPR003690 GO:0003690|GO:0006355
Tsu07g01895 351 PANTHER CGI-12 PROTEIN-RELATED 105 345 IPR003690 GO:0003690|GO:0006355
Tsu07g01895 351 SMART mt_12 268 302 IPR003690 GO:0003690|GO:0006355
Tsu07g01895 351 SMART mt_12 236 267 IPR003690 GO:0003690|GO:0006355
Tsu07g01895 351 SMART mt_12 167 197 IPR003690 GO:0003690|GO:0006355
Tsu07g01895 351 SMART mt_12 100 131 IPR003690 GO:0003690|GO:0006355
Tsu07g01895 351 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 105 345 - -
Tsu07g01895 351 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 22 103 - -
Tsu07g01895 351 Pfam mTERF 211 319 IPR003690 GO:0003690|GO:0006355
Tsu07g01895 351 Pfam mTERF 78 197 IPR003690 GO:0003690|GO:0006355
Tsu07g01895 351 Gene3D Transcription termination factor 3, mitochondrial 60 337 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01895 Tsu-Chr7 19125630 19127879 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu07g01895 mTERF 3e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01895 K15032 - gmx:102663414 279.256