Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01894 atgtttaatttcaattcaTGGCGCCAAAAAACCCTAATCTATTATCTCAAGGGATTAACATTACAATCCCCAAACCCTAACCCTCTGTCGATTTCTCTTCATTTCTTCTGCACCAACACTTCCGATGATTCAACCTCATTTGCTTCTTCTTACCTCATCAACAATTTTGGGTTTTCCCCAAAATCTGCTTCCAAACTTTGTTCCACTTACAATGTTACTTTTAAGACTGCCCAAAAACCTGATTCAGTTCTCAATTTCTTTAGAAACAATGGTTTCTCAGACACCCAATTACGTCATATCATTGCAAAATCACCATGGCTTCTTTCCTGCAATCCCTCCAAAAGGGTGTTgccaaagtttgaatttttactCTCCAAAGGTGCTTCTAAATCTGACATTGTTAACATGGTCATTAAGAACCCTGCAGTCTTGTCTGCAAGCCTCGAGAATCGTATTGTCCCAGCCTATGAATTTGTTTATAGATTCTTGCAATCAGACAAGGAAACTATTGCTATGTTGAATTACAATCCAACTatctttggatcagcttatGTGGTGCATAACATCAAAGTGCTTATTGAGAGTGGAGTAACTGACTCAAATATTGCAAGATCGCTTCGGACATGGATTAAGTTATTCTACAGAACGGACTTGCATGAATTGGTGGAGGAATTGAAGGGTTTGGGGTTTGATCCTTCGCGGTCAATTTTCGCAATAGCATTGATTGCCAAAACATCAATAACCAAAACCTTGTGGAAAGAGAAAGTTGATGCTTTTAAGAAATGGGGTTGGTCTAATGAAGATATTCTTAAAGCATTTAGAAAGCAACCTCATTGTATGTTAACATCcattgataaaattaatttagtgaTGAGCTATTGGGTCAATCAGTTGGGTTGGGATGCTCTGGCCGTTGCCAAAACGCCAAGGGTTTTTGGGGCCAGTTTGGAGCAAAGAATCATACCAAGAGCTTCGGTTTtgcaatatcttttgaagaAAGGTTTGCTAAAAAAGGAAGCAAGTTTAACTTCTCCATTTGTAGTCAAGGAGAAGATTTTCCTTGACATGTATATAAATCGTTTTAAGGAGGAGTCTTCTTATCTATTAAGGCTTTATGAAGAAAAACTGAATCTTGCACAAACCAAGGAAAAAACTGGCACGATATGA 1167 0.3573 MFNFNSWRQKTLIYYLKGLTLQSPNPNPLSISLHFFCTNTSDDSTSFASSYLINNFGFSPKSASKLCSTYNVTFKTAQKPDSVLNFFRNNGFSDTQLRHIIAKSPWLLSCNPSKRVLPKFEFLLSKGASKSDIVNMVIKNPAVLSASLENRIVPAYEFVYRFLQSDKETIAMLNYNPTIFGSAYVVHNIKVLIESGVTDSNIARSLRTWIKLFYRTDLHELVEELKGLGFDPSRSIFAIALIAKTSITKTLWKEKVDAFKKWGWSNEDILKAFRKQPHCMLTSIDKINLVMSYWVNQLGWDALAVAKTPRVFGASLEQRIIPRASVLQYLLKKGLLKKEASLTSPFVVKEKIFLDMYINRFKEESSYLLRLYEEKLNLAQTKEKTGTI 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01894 388 PANTHER CGI-12 PROTEIN-RELATED 26 380 IPR003690 GO:0003690|GO:0006355
Tsu07g01894 388 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 26 380 - -
Tsu07g01894 388 Pfam mTERF 84 231 IPR003690 GO:0003690|GO:0006355
Tsu07g01894 388 Pfam mTERF 251 353 IPR003690 GO:0003690|GO:0006355
Tsu07g01894 388 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Tsu07g01894 388 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Tsu07g01894 388 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Tsu07g01894 388 SMART mt_12 302 336 IPR003690 GO:0003690|GO:0006355
Tsu07g01894 388 Gene3D Transcription termination factor 3, mitochondrial 165 369 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01894 Tsu-Chr7 19121601 19122767 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu07g01894 mTERF 4.6e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01894 K15032 - gmx:102663414 381.719