Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01892 ATGTTCAATACACCACCACCTTTTCTCCATCTCAAAAACCACTTAACTCCATCACCATGTTCTCTGCATTTTTCCACCAACAGCACTTCTGATTCAGTAACCTCATTTGCAGTCTCTTACCTCATCAACAATGTTGGGTTTTCACCACAATCTGCTTCCAAACTTTGCTCCACTTACAATCTTCATTTCAAGAATGCCCAAAAACCTGATTCAGTTCTTCTTTTCTTTAGAAACCATGGTTTCTCAGACACCCAATTACGTCATATCCTTACAAATTCACCAGACCTACTTTCCTGCAACCCCTCCAAAAGGGTATTgccaaagtttcaatttttactCTCCAAAGGTGCTTCTAACTCTGACATTGTTAACCTTGTCAATAAGAACCCTAGAATTTTGTCTCTAAGTATGGAGAATCATATAGTCCCAATCTATGAATTGCTTCATAAATTCTTGCAATCAGAAGAGGACACTGTTGCTCTTGCAATTCACAAGCCATATTTACTTAGTCACAATCGTGTGCCAGATAACATCACAATGTTGGTTGAGACTGGAGTGAGGGACTCAACCATTGCAAGATTGCTTCGGTCACCATCTCGGGTATTTACTTCGAGTAAATGTTACATGCTGGAGTTGGTGGAGGAATTGAAGGATTTGGGTTTTAATCCTTCAAAAGTAACCTTTGGTATAGCAATGGCAGCCAAACAATCTGTAAACAAAACATTGTGGAAAGAGAAAGTTGATGCCTTTAAGAAATGGGggtggtctgatgaagatgttCTCGAAGCATTTAGACGGCAGCCTCACTGTATGTTAACATCCattgataaaattaattcaGTAATGAGCTTTTGGGTCAATCAGTTGGGTTGGGATGTGCTTGACCTTGCAAAAGGACCATCGGTTTTTTCAATTAGTTTGGAAAAAAGGATCATTCCAAGGGCCCCCGTTGTGCAGTTTCTGTTGAAGAAAGGTTTGCGAAAAAAGAATGCTAGCTTAGCTTATCCATTTCTAGTCAGCGATAAGATGTTCAGTGACAAATTTATAAACCGTTATGAGGAGGAGTCATCTTATCTATTAAAGCTTTACgaagaaaaattgattcttgCACACACCAGGGAGGACAAAACTGACATGTCGTGA 1143 0.3745 MFNTPPPFLHLKNHLTPSPCSLHFSTNSTSDSVTSFAVSYLINNVGFSPQSASKLCSTYNLHFKNAQKPDSVLLFFRNHGFSDTQLRHILTNSPDLLSCNPSKRVLPKFQFLLSKGASNSDIVNLVNKNPRILSLSMENHIVPIYELLHKFLQSEEDTVALAIHKPYLLSHNRVPDNITMLVETGVRDSTIARLLRSPSRVFTSSKCYMLELVEELKDLGFNPSKVTFGIAMAAKQSVNKTLWKEKVDAFKKWGWSDEDVLEAFRRQPHCMLTSIDKINSVMSFWVNQLGWDVLDLAKGPSVFSISLEKRIIPRAPVVQFLLKKGLRKKNASLAYPFLVSDKMFSDKFINRYEEESSYLLKLYEEKLILAHTREDKTDMS 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01892 380 Gene3D Transcription termination factor 3, mitochondrial 135 362 IPR038538 -
Tsu07g01892 380 SMART mt_12 261 292 IPR003690 GO:0003690|GO:0006355
Tsu07g01892 380 SMART mt_12 87 118 IPR003690 GO:0003690|GO:0006355
Tsu07g01892 380 SMART mt_12 192 222 IPR003690 GO:0003690|GO:0006355
Tsu07g01892 380 SMART mt_12 293 327 IPR003690 GO:0003690|GO:0006355
Tsu07g01892 380 SMART mt_12 123 154 IPR003690 GO:0003690|GO:0006355
Tsu07g01892 380 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 16 372 - -
Tsu07g01892 380 Pfam mTERF 240 344 IPR003690 GO:0003690|GO:0006355
Tsu07g01892 380 Pfam mTERF 74 226 IPR003690 GO:0003690|GO:0006355
Tsu07g01892 380 PANTHER CGI-12 PROTEIN-RELATED 16 372 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01892 Tsu-Chr7 19092485 19093627 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu07g01892 mTERF 1.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01892 K15032 - gmx:102663414 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04225 04 50516502 50517662 Tsu07g01892 07 19092485 19093627 PCT