Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01889 ATGTTCAATACACATCCTCATACACCATCTTTTCTCTACATCAACAACCACTTAACTTTCCCTCTTATCATCCATCACTATCCATTACAATTTTCTCTACATTTCTGCAACAACACTTCTGATTCAACAACCTCATTTGAAGTCTCCTATCTCATCAACAATTTCGACTTCTCTCCACAATTTGCTTCCAAACTCTGCTCAACTTACAAGGTTCGTTTCAAGACTTCCCAAAACCCTGATTTAGTTCTCAATTTCTTTAGAAACAATGGTTTCTCAGAAACCCAATTACGTTATATCATTTCCAAGGCACCAAGGTTACTTTCCTGTGACCCTTGCAAAAGGGTGTTgccaaagtttcaatttttactCTCCAAAGGTGCTTCTAACTCTGAAATTGTTAACCTTGTTAGTAAGAACCCTATGGTTCTGTCTCCAAGCTTGGAGAATCATATAATCCCAACCTATGAATTGCTTTATAGATTTTTGCAATCAGATAAGGACATTATTGCTGGTGCAGTTCATAATCCAGCTTTACTTAGTGACCATCTTGTGCCACAAAACATCACAATGTTAATTAAGAATGGAGTTACAGATTCAAGCATTGCAAGATTGTTTCGGACACGGTCTCGGTCGTTGAATTCGAATACAGGTTGGATGATGAAATTGGTGGAGGAATTGAAGGATTTGGGTTTTAATCCATCAAAAATAACGTTTGGTATAGCATTGGAAGCAAAACTAACTATAAACAAAACATTGTGGAAAGAAAAAGTTGACGCCTTTAAGAAATGgggttggtctgatgaagatgtgATAGAAGCATTTAGAAGGCAGCCTCACTGGACAAAACCAGCATGTCATGATCAAGTTTTCAGCTATACTGGAATAGGCTGCTGGATTCAAAATGGTTTCAAGTAG 915 0.3563 MFNTHPHTPSFLYINNHLTFPLIIHHYPLQFSLHFCNNTSDSTTSFEVSYLINNFDFSPQFASKLCSTYKVRFKTSQNPDLVLNFFRNNGFSETQLRYIISKAPRLLSCDPCKRVLPKFQFLLSKGASNSEIVNLVSKNPMVLSPSLENHIIPTYELLYRFLQSDKDIIAGAVHNPALLSDHLVPQNITMLIKNGVTDSSIARLFRTRSRSLNSNTGWMMKLVEELKDLGFNPSKITFGIALEAKLTINKTLWKEKVDAFKKWGWSDEDVIEAFRRQPHWTKPACHDQVFSYTGIGCWIQNGFK 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01889 304 PANTHER CGI-12 PROTEIN-RELATED 21 280 IPR003690 GO:0003690|GO:0006355
Tsu07g01889 304 SMART mt_12 97 128 IPR003690 GO:0003690|GO:0006355
Tsu07g01889 304 SMART mt_12 202 232 IPR003690 GO:0003690|GO:0006355
Tsu07g01889 304 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
Tsu07g01889 304 Gene3D Transcription termination factor 3, mitochondrial 62 184 IPR038538 -
Tsu07g01889 304 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 21 280 - -
Tsu07g01889 304 Pfam mTERF 83 279 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01889 Tsu-Chr7 19077794 19079312 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu07g01889 mTERF 4.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01889 K15032 - gmx:102666855 278.87