Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01854 ATGGCGGAATCGGCGGAGATAAAGAGTAAGCAACGAGACTTCCCTTTGGCATGTGTCAGTCAGCTCtcttcaccttcttcttcttctgcttcACCGGGGATTGTCCGCCTTACCACCAACGCTCTTCAAATTCACCATGATTCTCACCAGATTGCTCTCGATGTTAATCTTCCAGATATTCAGATATTCAGATTAGGTCCTGTTCAATCGGTTTGCACGGTGGAAGGTTCTGATGCTGGCAAACAGACATCTTATTCCAGAGGAGTTGCTATACAGTTTAGAAATGAGGAAGAGAGTGAGGCCTTCCATTGTGTATTCCAACAATGGAAGAAGGAATTCAATGTTCAAGGAGGGAACATAATGAATGGAACTAATGTAATGACTTCCAAAAGCAAATTTGATGAAAAGATAGAGCCATCTTCTGCAAAAATGTATTTTCATTATTATGGACAGCTTCTTCATCAGCAAAATATGTTGCAGGACTATGTGAGGACAGgtacATATTATGCTGCTGTTATGGAGAACCGCACTGATTTCTTTGGTCGTGTAGTAGTTGATGTTGGCGCCGGTAGTGGTATTTTGTCATTATTTGCTGCTCAGGCAGGTGCAAAACATGTATATGCAATAGAAGCATCTGAAATGGCAGAATACGCACGCAAACTTATAGCTGGGAACCCGCTACTGGGTCAACGAATTACTgTTATCAAAGGAAGAGTTGAGGATGTTGTATTGCCAGAGAAAGCAGATATTCTGATATCTGAGCCCATGGGCACCTTGTTAGTTAATGAAAGAATGCTGGAGTCTTATGTTATTGCCAGAGATAGGTTTCTTACCCGTAATGGCAAAATGTTTCCTACATCGGGAAGGATTCACATGGCTCCTTTCAGTGATGAATATTTGTTTGTTGAAATTGCTAGTAAGGGGCTGTTCTGGCAGCAGCAAAATTATTATGGTGTTGATTTGACGCCCTTACACGGGACTGCCTATCAAGGATACTTCTCTCAGCCTGTTGTGGATGCTTTTGATCCAAGGTTGTTAATATCTCCTCCTATGTTCCATCCGATGGACTTTACCAAAATAAAGGAAGAAGAGCTGTATGAAATCGACATTCCTCTCAGATTTATAGCCAGTGTGGGTGCTAGAGTACATGGTTTGTCATGTTGGTTTGATGTACTGTTCAATGGAAGTTCTGTACAAAGGTGGCTTACCACTGCCCCTGGTTCACCGGTAACTCATTGGTATCAGTTACGCTGCGTTCTCTCCCAGCCTATTTATGTCATGGCAGGGCAAGAAATTACTGGCAGGCTGCACTTGATTGCCCACAGTGCACAGAGTTACACAATCTATTTAACCTTGTCAGCTAAAATGTGGGGGCCTGGCGCTGAGCAAGGAGGGATTCTTCAAACATCATCCTGTAAACTTGATCTGAAAGAACCATACTATAGAATGTCTCAACCGCAAGCTTATCCATCAACCCAAGATCATCAACCTCAACCATTTTTATCGACACAGGATGTAAAGAACCAATCTCAGGATTTGGATGACACTGAGATAATGCAACCGCCTTCACCTTATTCACGTGTGCAGATTGACTCGTTTATGCAGAATGCATAA 1614 0.4176 MAESAEIKSKQRDFPLACVSQLSSPSSSSASPGIVRLTTNALQIHHDSHQIALDVNLPDIQIFRLGPVQSVCTVEGSDAGKQTSYSRGVAIQFRNEEESEAFHCVFQQWKKEFNVQGGNIMNGTNVMTSKSKFDEKIEPSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVMENRTDFFGRVVVDVGAGSGILSLFAAQAGAKHVYAIEASEMAEYARKLIAGNPLLGQRITVIKGRVEDVVLPEKADILISEPMGTLLVNERMLESYVIARDRFLTRNGKMFPTSGRIHMAPFSDEYLFVEIASKGLFWQQQNYYGVDLTPLHGTAYQGYFSQPVVDAFDPRLLISPPMFHPMDFTKIKEEELYEIDIPLRFIASVGARVHGLSCWFDVLFNGSSVQRWLTTAPGSPVTHWYQLRCVLSQPIYVMAGQEITGRLHLIAHSAQSYTIYLTLSAKMWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYPSTQDHQPQPFLSTQDVKNQSQDLDDTEIMQPPSPYSRVQIDSFMQNA 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01854 537 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 7 493 IPR025799 GO:0016274|GO:0018216
Tsu07g01854 537 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 148 459 IPR029063 -
Tsu07g01854 537 Gene3D Vaccinia Virus protein VP39 124 285 IPR029063 -
Tsu07g01854 537 PANTHER HISTONE-ARGININE METHYLTRANSFERASE 1.4-RELATED 7 493 - -
Tsu07g01854 537 Gene3D - 287 496 - -
Tsu07g01854 537 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 138 453 IPR025799 GO:0016274|GO:0018216
Tsu07g01854 537 CDD AdoMet_MTases 184 292 - -
Tsu07g01854 537 Pfam Ribosomal protein L11 methyltransferase (PrmA) 181 254 - -
Tsu07g01854 537 MobiDBLite consensus disorder prediction 487 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01854 Tsu-Chr7 18570345 18577242 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01854 145 434 C2H2 Transcription Factor Family AT3G12270 32.792 2.22e-37 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01854 K05931 - gmx:100818828 911.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01854 07 18570345 18577242 Tsu07g01854 07 18570345 18577242 ECH
Tsu04g04242 04 50626890 50633038 Tsu07g01854 07 18570345 18577242 PCT