Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01851 ATgtcttctttttcatcttcatGGCTTACTTCACCTTCATGCAATCTTATAGATTCATCTTCTTCTACACCAAACCTTATACTTCAATGGTTAACCTTTCTTTTTCTATCTCCATGTCCTCAAAGAGTCCTTATTTCTGCTCTTGATTCCTTGGTTTTGCTCTCTCTTTTAGCTTTTGCAGCTTACAAGCTCTACTCAAGGTTGAACTCAAGAGGAAACTCTAGCTCCTCAATCACAAAACCACTTTTGCAGGAGAAAGATTCTGATTATAGAATCACTTTTTGGTTCAAATTACCTTTGTTGGTAACTATCCTTTTGGCTTTAACTTATACTGTTCTAGGAATCTTGGCTTTTACTCAAACAAAAGTTGCTTCATGGAAACAAATAGAATCACTTTTTCGGTTGTTTCAAGCAATAGTTAACATAGTGATAGTGATTCTATTGGTACATGAGAAAAAATTCAAAGCTTCTAAACACCCTTTAGCAGTAAGAATCTATTGGATAGGAAACTTTGTGATTGCTACTTTGTTTGCTGTTTCGGCTATTGTTCGAATGATAACTGTTAGTGAAAAGAGTTTGGAGATTAGTTTGAGAATAGATGATATATTCTCATTGGTTAATCTTCCATtatctttgttgttttttgtgaTAGCTATAAAAGGGTCATCAGGGATTCATGTGATAAGAATATCTGATGTAGTAGTATCAACATATCGATCGATTTCAACCGATAGAACTTTGAGTCCTTATGCTTATTCTTCATTTTTGTCCAAAACAGTTTGGTATTGGATGAATCCTTTAATCAATAAAGGTTACAAAGAACCCCTTAAACTAGAAGATGTTCCTTCACTTCCTCTTGATTTTAGAGCAGAAAAAATGTCAGAACTTTTTCAAAGTAATTGGCCAAAACCAGAAGAAAACAGTAAACATCCAGTTGGATTAACCCTTTTTAGGTGTTTTTGGAAACAATTAGCTTTCACTGGCCTTCTTGCAATCATTAGGCTTTGTGTTATGTATGTCGGTCCATTGTTGATTCAAAGTTTTGTTGATTTCACTTCAAGGAAAGATAGTACTGCTACTGAAGGTATTGTTTTGATATTGATCCTTTTTGCAGCGAAATCGGTTGAAGTACTTAGTGTTCATCAATTCAACTTCCACTCTCAGAAACTTGGTATGCTTATTCGTTCGAGCATAATCACTTCGGTTTACAAAAAGGGTTTAAGGTTGTCAAGTTCTTCAAGACAAGCTCATGGAACTGGACAGATTGTTAACCACATGGCTGTTGATGCTCAACAACTCTCAGATTTGATGATGCAGTTTCATCCTATATGGTTGATGCCATTACAAGTTGCTGCAGCATTGGCTCTTATGTATAGCTATGTCGGTATAGCTGTTCTTGCAGCATTGCTTGGAACTACCATTGTGTTTCTCTTCACGCTTTATCGAACGAAGAGTAGTAATAGTTTCCAGTTTCGGATAATGACTAGCCGTGATTCGAGGATGAAGGCGACAAATGAGTTGCTTAACAACATGCGTGTGATTAAGTTTCAAGCTTGGGAAGAGTATTTTGgtaacaaaattcaaaagtttcGTGAAACCGAACATGGATGGATTGGCAAATTCTTGTACTATTTTGCTGTTAACATGGGAGTTTTGTCTACTGCTCCATTAACTGTAACTGTTCTTACCTTTGGAACTGCAACTTTTATCGGAATGCCTTTGGATGCTGGTACTGTTTTCACAATAACTTCGATTATCAAGATACTTCAAGAGCCCGTGAGGACTTTTCCTCAAGCTCTTATCAATATTTCTCAAGCAACAATTTCATTAGGGAGGTTGGATGCGTTCATGAGTAGTACGGAAATGGACGCGAATGCAGTGCAAAGAGAGGAGAATTGTGATGGTGACATAGCTGTCGAGATTAAAGATGGGAAATTCTCTTGGGATGATAAGGATGAGAATGTAGCTTTGACAGTTGATGAGTTAGTAATTAAGAAAGGGGATCATGCTGCTGTTGTAGGAACTGTTGGATCCGGCAAGTCTTCGTTACTGGCTTCTGTTTTGGGAGAAATGTTCAAGATCTCAGGAAAGGTTAGAGTATGTGGGACGACGGCTTATGTAGCACAAACATCATGGATTCAGAATGCAACCATCAAAGAAAACATATTGTTTGGCTTACCATTGAACATAGAAAAGTACAGGGAAGCTATAAGAGTGTGCTGCCTTGAAAAGGATCTTGAAATGATGGAAGATGGTGACGAAACCGAGATTGGAGAGCGTGGTATTAACCTCAGTGGTGGCCAGAAACAACGCGTACAACTTGCTAGAGCTGTATATCAAGACACTGACATCTATCTACTTGATGATGTATTCAGTGCTGTTGATGCTCAAACAGgatcatttatttttaagGAATGTATCTTGGGAGCTCTCAAAGATAAGACTGTTTTACTTGTAACTCACCAAGTTGATTTCTTGCATAATGTTGACTCTATAATGGTGATGCGCGAAGGGAAAGTAGTGCAAAGTGGAAAATACGATGAACTTCTCAAAGCAGGCCTAGACTTTGGTGCACTTGTGGCAGCTCATGAATCCTCTATGGAAATTGCAGAAACAAGTGATAAAAATGGTGATGATTCAGCTCAATCTCCAAAACTAGCCCGCATCgcttcaaaagaaaaagaaagtgtcGGTGAAAAGCAGTCTTCTCAAGATCAATCTAAGTCTGATAAAACTGCAGCAAAGCTCGTTGAAGACGAGGAAAGAGAAACTGGACGTGTGAACCTTAAAGTATACAAACATTATTTCACTCAAGCATTTGGATGGTGGGGAATAGCATTGATGGTTGCAATGTCTGTGGCTTGGATGCTTTCATTTTTGGCTGGTGATTATTGGCTAGCAATTGCAACTGCTGAAGATTCTAGCGTTCCTTCGTTCACATTCATTATCGTCTATGCTATTATAGCTGTTGTTGCATGCATAGTTGTGATGGCAAGAGCTTTCTTATTTACATATTGGGGTCTAAAGACATCTCAAAGCTTCTTCATTGGAATGCTTCAAAGTATCTTACATGCACCCATGTCATTCTTCGATACTACTCCTTCTGGCAGAATATTGAGTCGTgtATCTACTGATATACTTTGGGTGGATATATCAATTCCAATGTTGGTAAACTTTGTAATGATAGCATACTTATCATTATTCAGTATCCTCATTGTCACATGCCAGAATTCTTGGGAGACTGTATTCCTCTTAATTCCACTGTTTTGGCTCAACAACTTGTATAGGAAATACTATCTTGCAACTTCTAGGGAATTAACACGACTTGATTCAATCACAAAGGCTCCAGTGATTCATCACTTTTCAGAGACCATTTCTGGTGTTATGACAATCCGTAGCTTGAGAAAGCAGAATGCATTTTCTCAGGAAAACATCGACAGGGTGAATGCAAGTCTAAGAATGGATTTTCATAACAATGGAGCAAATGAATGGCTTGGTTTTCGCTTGGACTATATGGGAGTTGTTTTCCTTTGCATTGCCACGGTTTTTATGATCTTCTTGCCAAGTGCTATTGTTAAGCCAGAATATGTTGGTATGTCTCTATCCTATGGCTTGGCTCTAAGTGGTCTCTTGTCATTTACCATAACAATGACTTGTTCTGTTGAGAACAAAATGGTTTCAGTTGAGAGGATAAAACAGTTTACCAATCTCCCATCAGAAGCTCAATGGAAAATAGCCGACAAGTCACCTCCTCAGAATTGGCCTAATCATGGCACTATAGAGTTAAATAATTTACAGGTTAGGTACAGACCAAACACTCCTCTAGTTCTTAAGGGAATCTCTCTAACCATTGAAGGTGGAGAAAAAGTCGGTGTTGTTGGTCGTACCGGAAGTGGAAAATCAACACTCATTCAAGTGTTATTTAGATTAATTGAGCCTTCAGCTGGGAAAATAATCATTGATGGTATCAACATTTCCAATATTGGCCTTCATGATTTAAGGTCACGTTTCGGAATTATTCCACAAGAGCCTGTCCTCTTTCAAGGAACAGTAAGAACCAATATTGACCCTCTTGGAATATATTCAGAAGAAGAAATTTGGAAGAGTCTCGAGCGCTGCCAATTGAAAGAAGTGGTGGCTGCAAAGCCTGAGAAACTCGAGGCTTCAGTGGTTGATGGTGGAGACAATTGGAGTGTCGGGCAAAGACAGCTTCTATGCTTAGGAAGGATCATGCTAAAACGAAGCAAAATACTATTCATGGACGAAGCAACAGCATCGGTTGATTCACAAACTGATGCTGTTATACAAAAGATCATCAGAGAGGACTTTGCCGATCGTACAATTGTTAGCATTGCTCACAGAATACCAACAGTTATGGATTGTGACAAAGTTTTGGTCATAGATGCAGGTTTGGCAAAGGAATATGACAAGCCATCACGTTTGCTTGAAAGGCATTCACTTTTTGCAGCATTGGTTAAGGAATATTCTAATAGATCAGCTtaa 4503 0.3775 MSSFSSSWLTSPSCNLIDSSSSTPNLILQWLTFLFLSPCPQRVLISALDSLVLLSLLAFAAYKLYSRLNSRGNSSSSITKPLLQEKDSDYRITFWFKLPLLVTILLALTYTVLGILAFTQTKVASWKQIESLFRLFQAIVNIVIVILLVHEKKFKASKHPLAVRIYWIGNFVIATLFAVSAIVRMITVSEKSLEISLRIDDIFSLVNLPLSLLFFVIAIKGSSGIHVIRISDVVVSTYRSISTDRTLSPYAYSSFLSKTVWYWMNPLINKGYKEPLKLEDVPSLPLDFRAEKMSELFQSNWPKPEENSKHPVGLTLFRCFWKQLAFTGLLAIIRLCVMYVGPLLIQSFVDFTSRKDSTATEGIVLILILFAAKSVEVLSVHQFNFHSQKLGMLIRSSIITSVYKKGLRLSSSSRQAHGTGQIVNHMAVDAQQLSDLMMQFHPIWLMPLQVAAALALMYSYVGIAVLAALLGTTIVFLFTLYRTKSSNSFQFRIMTSRDSRMKATNELLNNMRVIKFQAWEEYFGNKIQKFRETEHGWIGKFLYYFAVNMGVLSTAPLTVTVLTFGTATFIGMPLDAGTVFTITSIIKILQEPVRTFPQALINISQATISLGRLDAFMSSTEMDANAVQREENCDGDIAVEIKDGKFSWDDKDENVALTVDELVIKKGDHAAVVGTVGSGKSSLLASVLGEMFKISGKVRVCGTTAYVAQTSWIQNATIKENILFGLPLNIEKYREAIRVCCLEKDLEMMEDGDETEIGERGINLSGGQKQRVQLARAVYQDTDIYLLDDVFSAVDAQTGSFIFKECILGALKDKTVLLVTHQVDFLHNVDSIMVMREGKVVQSGKYDELLKAGLDFGALVAAHESSMEIAETSDKNGDDSAQSPKLARIASKEKESVGEKQSSQDQSKSDKTAAKLVEDEERETGRVNLKVYKHYFTQAFGWWGIALMVAMSVAWMLSFLAGDYWLAIATAEDSSVPSFTFIIVYAIIAVVACIVVMARAFLFTYWGLKTSQSFFIGMLQSILHAPMSFFDTTPSGRILSRVSTDILWVDISIPMLVNFVMIAYLSLFSILIVTCQNSWETVFLLIPLFWLNNLYRKYYLATSRELTRLDSITKAPVIHHFSETISGVMTIRSLRKQNAFSQENIDRVNASLRMDFHNNGANEWLGFRLDYMGVVFLCIATVFMIFLPSAIVKPEYVGMSLSYGLALSGLLSFTITMTCSVENKMVSVERIKQFTNLPSEAQWKIADKSPPQNWPNHGTIELNNLQVRYRPNTPLVLKGISLTIEGGEKVGVVGRTGSGKSTLIQVLFRLIEPSAGKIIIDGINISNIGLHDLRSRFGIIPQEPVLFQGTVRTNIDPLGIYSEEEIWKSLERCQLKEVVAAKPEKLEASVVDGGDNWSVGQRQLLCLGRIMLKRSKILFMDEATASVDSQTDAVIQKIIREDFADRTIVSIAHRIPTVMDCDKVLVIDAGLAKEYDKPSRLLERHSLFAALVKEYSNRSA 1500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01851 1500 Pfam ABC transporter 662 790 IPR003439 GO:0005524
Tsu07g01851 1500 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 60 1500 - -
Tsu07g01851 1500 Coils Coil 1131 1151 - -
Tsu07g01851 1500 CDD ABC_6TM_ABCC_D2 941 1235 IPR044726 GO:0140359
Tsu07g01851 1500 SUPERFAMILY ABC transporter transmembrane region 315 618 IPR036640 GO:0005524|GO:0016021
Tsu07g01851 1500 Pfam ABC transporter transmembrane region 326 593 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tsu07g01851 1500 Pfam ABC transporter transmembrane region 965 1187 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tsu07g01851 1500 ProSitePatterns ABC transporters family signature. 764 778 IPR017871 GO:0005524
Tsu07g01851 1500 Gene3D ABC transporter type 1, transmembrane domain 310 622 IPR036640 GO:0005524|GO:0016021
Tsu07g01851 1500 Gene3D ABC transporter type 1, transmembrane domain 907 1242 IPR036640 GO:0005524|GO:0016021
Tsu07g01851 1500 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 325 605 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tsu07g01851 1500 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1250 1493 IPR027417 -
Tsu07g01851 1500 SMART AAA_5 1286 1471 IPR003593 -
Tsu07g01851 1500 SMART AAA_5 666 847 IPR003593 -
Tsu07g01851 1500 CDD ABCC_MRP_domain1 639 839 - -
Tsu07g01851 1500 SUPERFAMILY ABC transporter transmembrane region 942 1240 IPR036640 GO:0005524|GO:0016021
Tsu07g01851 1500 CDD ABCC_MRP_domain2 1258 1478 - -
Tsu07g01851 1500 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 942 1223 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Tsu07g01851 1500 MobiDBLite consensus disorder prediction 892 919 - -
Tsu07g01851 1500 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 60 1500 - -
Tsu07g01851 1500 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 636 858 IPR027417 -
Tsu07g01851 1500 CDD ABC_6TM_ABCC_D1 326 613 IPR044746 GO:0140359
Tsu07g01851 1500 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 639 862 IPR003439 GO:0005524
Tsu07g01851 1500 Gene3D - 1243 1494 IPR027417 -
Tsu07g01851 1500 Pfam ABC transporter 1277 1425 IPR003439 GO:0005524
Tsu07g01851 1500 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1260 1494 IPR003439 GO:0005524
Tsu07g01851 1500 Gene3D - 634 865 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01851 Tsu-Chr7 18542777 18550267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01851 639 851 Calmodulin-binding Proteins AT2G36910 31.278 5.41e-22 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01851 - K05665 gmx:100780167 2447.54