Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01835 ATGAGTATAAAAGGTTACACAATTTGCACCCTTACCTCAATTTCAATACTTTCCTTGATTACCTTCATCATATATTTGATAATTGTCACCACATCCCCCTTCAATGTCAAGTTCCACATAACAAAGGTCTCCCTTAAACAATTCAACCTCACAAGCAACAATACCTTAAATTACAACTTTAAGGTTAACATTACAGCAAGAAACCTTAACAATAATGGAAAAATTCATTATAGGAGGATCACAGCAGTTGCATGGTATAAAGATCATGATTTTGCATGGGTGAGTTTGACACCTTTTGACCAAAGGAAAAAGAGTACTACTTTACTTGGGCCAATAGTTTTTGAAGGGAACTATGTGATTAACCTTAAAGAAAAACAACTTAATGAATATAAAGAGGAGACACTTGTTGGAATTTATAAAGATTTTGCTGTGGATTTGGAACTTAAAATTAAAGCCAAATTTGGAGGGTTTAAGAGTAGCCATATTCCGATAGTGCAATGTCGTCGTTTGAAAGTTCCTTTGATTTCTAATAGTGAATCATCATCACCTGTCTTCAATGTTACTAGATGCAAGAATCGGTACCACAGACAACGTTCTTCGGTGTGGATTTTGAGTTCAAGGTCAAGATCTAAACCACGACGAGGACGGGGATGGTGA 657 0.3577 MSIKGYTICTLTSISILSLITFIIYLIIVTTSPFNVKFHITKVSLKQFNLTSNNTLNYNFKVNITARNLNNNGKIHYRRITAVAWYKDHDFAWVSLTPFDQRKKSTTLLGPIVFEGNYVINLKEKQLNEYKEETLVGIYKDFAVDLELKIKAKFGGFKSSHIPIVQCRRLKVPLISNSESSSPVFNVTRCKNRYHRQRSSVWILSSRSRSKPRRGRGW 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01835 218 PANTHER OS05G0367900 PROTEIN 18 195 IPR044839 GO:0098542
Tsu07g01835 218 Pfam Late embryogenesis abundant protein 64 164 IPR004864 -
Tsu07g01835 218 PANTHER HARPIN-INDUCED 1 18 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01835 Tsu-Chr7 18302450 18303106 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01835 35 182 SNARE and Associated Proteins AT1G32270 29.870 2.33e-14 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01835 - - mtr:MTR_2g048270 249.98