Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01818 ATGGAAAAAAACGATGACCCAATTCCCAAATTCAATAAAGATTCAAACCCAAACGCTTCCGATTCAAAAAGCTTCAATCTTAATGGAAAAATCATGCTCTGTGCAATCgttcttctcttcttcatcatcgTTTTAATGCTTTGTCTTCATATTTACGCTCGTTGGTACCTTATTCAATCTCGTCGCCGTCGTAACCGTCTCCGCCGTCGTACTCAGTTAGTTTTCTTCTCCGATAATCCACCAACAACCACCGCCGTTGTTACTTCACGTGGTCTTGAAGCTTCGGTTATTGCTTCGCTTCCGTTATTCATCTACGATCCGAAAACTCAACCGGAGAATTTGAATTCGTCGGAATGTGCTGTTTGTTTATCGGAATTTGAATCCGGTGAAACGGGTCGGGTTTTACCCAAGTGTAAACATAGTTTTCATATTGAGTGTATTGATATGTGGTTTCATTCTCATTCCACGTGTCCTCTTTGTCGTGCAACGGTTGAACCCGCATCCGAGTTTCAAACCCGACCCGAATTAGTTATAACTGTTTGTGAAGCGGAACCGGAAACTGGTTCGAGTTCTAGTTCCGGTTCGGGTTTAGAAGATGAGAATGTGAACCGAACCGGTAAAGAGGTTTGTTCGAGTTCGGTTGGGTTAAGGACAAAACCGTCTTTTGCGGGAGTGACAATTGAAGTACCTTCTAGGAACGAGTTGTGTTGTGACTCGCCGTCATCGACTCAGGCGTCGTTTCGGTCACCTATGAGTCGGATGTTGTCTTTTAAGAGGATTCTGAGTATGGATTGGAAAGGGAGTGTTTCTCCGTCGTCGTGCGGTGGTGGTGTTGGTGGTGGTTGTAGCTCGGTGGCTGAGTTAAAAGTAGAGCAAGGTGAACGAGTTGAGACACCGTGA 900 0.4389 MEKNDDPIPKFNKDSNPNASDSKSFNLNGKIMLCAIVLLFFIIVLMLCLHIYARWYLIQSRRRRNRLRRRTQLVFFSDNPPTTTAVVTSRGLEASVIASLPLFIYDPKTQPENLNSSECAVCLSEFESGETGRVLPKCKHSFHIECIDMWFHSHSTCPLCRATVEPASEFQTRPELVITVCEAEPETGSSSSSGSGLEDENVNRTGKEVCSSSVGLRTKPSFAGVTIEVPSRNELCCDSPSSTQASFRSPMSRMLSFKRILSMDWKGSVSPSSCGGGVGGGCSSVAELKVEQGERVETP 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01818 299 PANTHER RING-H2 FINGER PROTEIN ATL64 18 227 - -
Tsu07g01818 299 Pfam Ring finger domain 118 161 IPR001841 -
Tsu07g01818 299 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 167 IPR013083 -
Tsu07g01818 299 ProSiteProfiles Zinc finger RING-type profile. 119 161 IPR001841 -
Tsu07g01818 299 SMART ring_2 119 160 IPR001841 -
Tsu07g01818 299 CDD RING-H2_EL5_like 118 161 - -
Tsu07g01818 299 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 18 227 - -
Tsu07g01818 299 SUPERFAMILY RING/U-box 97 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01818 Tsu-Chr7 18095170 18096487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01818 1 271 Rapid Response to Elicitors AT3G16720 49.129 1.32e-70 219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01818 - - lja:Lj6g3v1468220.1 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu04g04259 04 50749172 50750182 Tsu07g01818 07 18095170 18096487 PCT