Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01811 ATGGCACCTCAAGCAAATCTTTCTATTGCCAAGATTGGTTATGAGATTGAAAAATTCTTTGGGAGGCAGAAAAGTTTTGGCAATAATAGCAACACTCCAGCAACACAAAATCTTTGTCAATACAAATGTTATCCGACCTATGGAGCTACTACAATAACCAAGGTGGTGCATACAAATTATGTTGAAGATCTCACTTGCAATGAAGTTGCTTCAAGATTtatagaagagaagagaaaagatCAGTTGCATGTTAAAGGTCCAAGTTTCGGTGGCTTGCTGTTATGTAGGGAGTTGATGGCTATTGGACCACTTCTATGTTGGCAGATGCTTATGTGGGTTGGGGCTGTTACACTCTCAGATAAGCGaccaaaccctaattttacAAAAGATTTTTCACGCTTGAAGAACGATGTCGAAATTCTTTGCTCAGGCTGGTGTAAGTACATGGTTGATAATGCTAGTGACAGCGATGAAGACGATGGCCATAGGCGTGTTGTTAAGTCGGCGAAAGATAAGCGATTTGAAGAGATGGGTGTAACGGTTGACCAGATGAAGAATGCAATGAAGATCAATGATTGGGTGAGTTTGCAAGAGAGTTTTGACAAGATTAATAAACAACTCGAGAAAGTGATGCGTGTTGCTGAGACTGATAAG 654 0.3838 MAPQANLSIAKIGYEIEKFFGRQKSFGNNSNTPATQNLCQYKCYPTYGATTITKVVHTNYVEDLTCNEVASRFIEEKRKDQLHVKGPSFGGLLLCRELMAIGPLLCWQMLMWVGAVTLSDKRPNPNFTKDFSRLKNDVEILCSGWCKYMVDNASDSDEDDGHRRVVKSAKDKRFEEMGVTVDQMKNAMKINDWVSLQESFDKINKQLEKVMRVAETDK 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01811 218 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT C 144 216 - -
Tsu07g01811 218 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 154 215 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
Tsu07g01811 218 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 144 216 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01811 Tsu-Chr7 17942186 17946310 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01811 150 218 Eukaryotic Initiation Factors Gene Family AT3G56150 71.014 3.67e-25 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01811 K03252 - mtr:MTR_2g435650 151.754