Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01805 ATGCAAGGGTATCTGAATCACTTTTTGGGAAATATTAGTATTGTTAACTCTCCCGAGGTTTGCAAGTTTTTGGAGGTGTCAATGTTATCTTTTTCACCGGAATATGGCCCTAAGCTGAAGGAAGAATCTGTTATGGTGAAGCATCTgcctaaaattaaaaaagatgaTGACTCCAGAAAATGTTGTTTTTCTGACTGTTTTAATTGTTGTAATGACAATTGGCAAAAGGTGTGGGCTGTACTGAAACCTGGATTCTTGGCATTGCTGGCACATCCTTTTGATACACAACCCTTGGACATTATTGTTTTTGATGTATTGCCCGCCTCAGATGCTAATGGAGATGGTCGTTTATCATTAGCGATTGAAATGAAGGAACGGAATCCTTTACGCCATTCATTCAAGGTGACTTGTGGAATCCGAAGTATTAGAATTAGAGTTAAAAGTAGTAGTAAAGTTAAAGATTGGGTCGCTGCAATTAATGATGCTGGACTCAGGCCTCCCGAAGGCTGGTGTCATCCTCACCGCTATGGTTCTTTTGCACCTCCAAGAGGCTTAATTGAAGATGACAGCCAAGCCCAGTGGTTTGTAGATGGGCAAGCAGCATTTGAGGTCATTGCTTCTTCAATCGAGGATGCCAAATCCGAGATATTTATCTGTGGGTGGTGGCTGTGCCCAGAACTGTATCTACGGCGACCTTTCCAGGCTCATGCTTCATCAAGGCTTGATAATCTGTTGGAAGCAAAAGCTAAGGAAGGGGTTCAGaTTTACATTCTTCTCTACAAAGAGGTGGCTCTTGCTTTGAAAATCAACAGTGTTTATAGCAAGAAAAAGCTTCTTAGCATTCATGAGAATGTGAGGGTATTACGCTATCCTGACCACTTTTCTACTGGTGTATACCTGTGGTCACACCATGAAAAACTTGTGATTGTTGATAATCATATTTGCTTCATCGGAGGACTGGATTTATGCTTTGGTCGATATGACTCACCTGAGCATAAAGTTGGAGATGTCCCTCCGCTAATGTGGCCTGGAAAGGACTATTACAACCCAAGAGAATCTGAACCAAATTCATGGGAAGATACAATGAAAGATGAATTGGATCGTGAAAAATATCCTCGTATGCCTTGGCATGATGTTCATTGTGCCCTCTGGGGACCACCTTGTCGTGACATTGCTAGGCACTTTGTTCAGCGATGGAATTATGCCAAGAGGAACAAAGCTCCACATGAACAACAAATACCATTACTTATGCCTCAACATCATATGGTTATTCCTCATTACTTGGGAAGCAGTGAGGCACCGATCGATATTCAGGACGATGTCAATGGTAGAGCCTTCAAGAGAGAAGATTCATTTTCCTCATGTTGCCAAGACCAAGATATTCCTCTACTCCTGCCTCAGGAACCGGGTGGGTTGGATATTCCTCCAGGACTCCCAAAACCAAATGGGCGAAACTCCACTCAACATAACCATGACAAGCCGAGAAGGATCAGCACTGGCCTTCCTTTCTCATTCCGAAGGGCCAAAGTAGCAGCAGTTGGTCCGGATACACCAATGAAGGGCTTTGTAGATGATCTTGACTCTGAGAATTATCAGAAAATGACTCATGATAGAGTGTCTCATGTTGATTCACAAAATATAGATCTGGACTGGTGGGATACTCAAGAGCGGGTTGATCAGGGAGGTTTTGCAGATGAATCTGGACAAATTGGTCCTCGTGCTTCGTGTCGTTGTCAGGTTATTAGAAGCGTCAGTCAATGGTCCGCCGGAACAAGTCAAACTGAAGAGAGCATCCACCATGCTTATTGCTCTCTCATTGAGAAAGCTGAATACTTCATCTACATTGAGAACCAGTTTTTTATCTCGGGTCTTTCTGGAGATGATATGATACGTAATCGTGTGTCAGAAGCTTTATATCGGCGAATTATGCGAGCTTATAATGACAAAAAATCTTTTAGGGTTATTGTCGTCATACCGCTCCTGCCTGGCTTCCAGGGGGGGATTGATGATGGTGGTGCAGCATCTGTGAGAGCCATAATGCATTGGCAGTACCGAACTATTTGCAGAGGGAACCACTCTATCTTACATAATCTTTCTGAGCTTCTTGGTTCAAGAGTACATGACTACATCTCTTTTTATGGCCTGAGGAATTATGGTAGACTCTCTGATGGTGGTCCTGTGGCAACCAGCCAGGTGTACGTTCATAGTAAAATcatgattattgatgattgtaTTAGTTTGATTGGATCTGCTAATATTAATGATAGAAGCTTACTTGGCTCCAGGGACTCTGAGATTGGTGTAGTTATAGAAGACAAAGAGTTGACTGATTCTTATATGGATGGAAAGCCTTGGAAGGCAGGGAAGTTTTCTTTGACTCTTCGATTATCATTATGGGCTGAACACTTGGGTCTCCCCGCAGGAGAGGTCAATCAAATAATGGACCCAATTGTTGATTCTACATACAAGGATATTTGGATGACAATAGCAAAGACAAATACTGCAATTTATCAGGATGTCTTTTCCTGTGTACCTAATGATCTGATACACACCAGACTTGCTTTCAGACAAAACATGGCTTTATGGAAAGACAAGATTGGACACACTACCATTGATTTAGGAATAGCCCCAGATAAACTAGAGTCCTATCAGGATGGAGATATCAAGAACACTCATCCCATGGAGAGATTAGCATCAATCAAGGGTCATCTTGTTTCTTTTCCCTTGGAGTTCATGAGTCAAGAAAGTCTAAGACCTACTTTTAGTGAAGGTGAATACTATGCCACTCAAGTTTTCCATTGA 2802 0.4183 MQGYLNHFLGNISIVNSPEVCKFLEVSMLSFSPEYGPKLKEESVMVKHLPKIKKDDDSRKCCFSDCFNCCNDNWQKVWAVLKPGFLALLAHPFDTQPLDIIVFDVLPASDANGDGRLSLAIEMKERNPLRHSFKVTCGIRSIRIRVKSSSKVKDWVAAINDAGLRPPEGWCHPHRYGSFAPPRGLIEDDSQAQWFVDGQAAFEVIASSIEDAKSEIFICGWWLCPELYLRRPFQAHASSRLDNLLEAKAKEGVQIYILLYKEVALALKINSVYSKKKLLSIHENVRVLRYPDHFSTGVYLWSHHEKLVIVDNHICFIGGLDLCFGRYDSPEHKVGDVPPLMWPGKDYYNPRESEPNSWEDTMKDELDREKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPHEQQIPLLMPQHHMVIPHYLGSSEAPIDIQDDVNGRAFKREDSFSSCCQDQDIPLLLPQEPGGLDIPPGLPKPNGRNSTQHNHDKPRRISTGLPFSFRRAKVAAVGPDTPMKGFVDDLDSENYQKMTHDRVSHVDSQNIDLDWWDTQERVDQGGFADESGQIGPRASCRCQVIRSVSQWSAGTSQTEESIHHAYCSLIEKAEYFIYIENQFFISGLSGDDMIRNRVSEALYRRIMRAYNDKKSFRVIVVIPLLPGFQGGIDDGGAASVRAIMHWQYRTICRGNHSILHNLSELLGSRVHDYISFYGLRNYGRLSDGGPVATSQVYVHSKIMIIDDCISLIGSANINDRSLLGSRDSEIGVVIEDKELTDSYMDGKPWKAGKFSLTLRLSLWAEHLGLPAGEVNQIMDPIVDSTYKDIWMTIAKTNTAIYQDVFSCVPNDLIHTRLAFRQNMALWKDKIGHTTIDLGIAPDKLESYQDGDIKNTHPMERLASIKGHLVSFPLEFMSQESLRPTFSEGEYYATQVFH 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01805 933 MobiDBLite consensus disorder prediction 466 499 - -
Tsu07g01805 933 SUPERFAMILY PH domain-like 71 162 - -
Tsu07g01805 933 PIRSF PLD_euk 1 343 IPR016555 GO:0004630|GO:0006654|GO:0048017
Tsu07g01805 933 PIRSF PLD_euk 339 433 IPR016555 GO:0004630|GO:0006654|GO:0048017
Tsu07g01805 933 PIRSF PLD_euk 426 933 IPR016555 GO:0004630|GO:0006654|GO:0048017
Tsu07g01805 933 Pfam Phospholipase D Active site motif 299 326 IPR001736 GO:0003824
Tsu07g01805 933 Gene3D - 49 163 IPR011993 -
Tsu07g01805 933 SMART pld_4 299 326 IPR001736 GO:0003824
Tsu07g01805 933 SMART pld_4 730 757 IPR001736 GO:0003824
Tsu07g01805 933 Pfam PLD-like domain 603 779 IPR025202 -
Tsu07g01805 933 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 730 757 IPR001736 GO:0003824
Tsu07g01805 933 PANTHER PHOSPHOLIPASE 2 930 - -
Tsu07g01805 933 SUPERFAMILY Phospholipase D/nuclease 149 419 - -
Tsu07g01805 933 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 299 326 IPR001736 GO:0003824
Tsu07g01805 933 Gene3D Endonuclease Chain A 184 422 - -
Tsu07g01805 933 CDD PLDc_vPLD1_2_yPLD_like_1 192 337 - -
Tsu07g01805 933 PANTHER PHOSPHOLIPASE D 2 930 IPR015679 -
Tsu07g01805 933 CDD PH_PLD 15 162 - -
Tsu07g01805 933 CDD PLDc_vPLD1_2_yPLD_like_2 590 774 - -
Tsu07g01805 933 Gene3D Endonuclease Chain A 545 790 - -
Tsu07g01805 933 SUPERFAMILY Phospholipase D/nuclease 548 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01805 Tsu-Chr7 17849335 17870028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01805 1 810 Phospholipase D Gene Family (Wang group) AT3G16785 72.073 0.0 1160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01805 K01115 - gmx:100780514 1677.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01805 07 17849335 17870028 Tsu07g01805 07 17849335 17870028 ECH