Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01804 ATGGCTCCTTTTCCATCTCTTGTCAATGTAATTACAAGAACAATCTCTTTGAAGAAAGACAAGAGTTATGGAAAAGATAATGATGCAAGAAAAGTTGTGGAAGCAATGGCAAAAGAAGCAAGGAAGAATGAAATGTTAATAAGCTCATCTGGAATTGTTAAATCTAGCAAGTCCAACAATTTTTCATGTGTGTTCACTAAGAAAGGTCAGAAAGGATTCAATCAAGACCGCCTTATCGTTTGGGAGGAATTTGGATGTCAAGAAGACATTATTTTCTGTGGAGTTTTTGATGGACATGGCCCTTGGGGACACTTTGTAGCTAAAAGAGTCAGAAAAATGTTGCCTACTTTTTTGTTCTGCAATTGGCAGGAAAATCTAGCAGAAAAATCTCTTGAAATGGATTTTAAGATGGAAACAAACCATAAGTATGATATATGGAAGCAGTCCTATATAAAGACTTTTGCTGCTATTGATCAGGACCTAAAGCAACATACTGGAATTGATTCATTTCAAAGTGGAACCACAGCTTTGACAGTTATCAAACAGGGTGAATATCTCATTATAGCAAATGTTGGTGATTCTAGAGCTGTCTTAGCAACCACTTCAGACAATGGCACATTGACTCCTACTCAGCTTACCACTGACTTGAAGCCAAATTTACCAAAGGAAGCGGAGCGCATAATGGAATCAAAAGGGAGAGTATTTTGTATGGAAGATGAACCAGGAGTGTATAGGGTATGGATGCCAAATGGTAAGACACCAGGACTAGCAATATCAAGAGCATTTGGTGATTATTGTGTAAAAGATTTTGGACTAATCTCTGTGCCTGATGTCACACAAAGAAAACTGACCTCTATGGATCAATTTGTCATCTTGGCAACTGATGGGGTATGGGATGTTATTTCAAACCAAGCAGCTATAAAAATTGTTGGTTCAACTCCAAATAGAGAAAAAGCAGCTGAAAGGCTAGTGAAATGTGCTACACATGAATGGAAACGTAAGAGAAAAGGCATTGCAATTGATGATATTTCAGCTATTTGTCTCTTCTTTCACTCTGCCTCTTCTCATGCAACTACTAAAGTTGTTGAATGA 1092 0.3755 MAPFPSLVNVITRTISLKKDKSYGKDNDARKVVEAMAKEARKNEMLISSSGIVKSSKSNNFSCVFTKKGQKGFNQDRLIVWEEFGCQEDIIFCGVFDGHGPWGHFVAKRVRKMLPTFLFCNWQENLAEKSLEMDFKMETNHKYDIWKQSYIKTFAAIDQDLKQHTGIDSFQSGTTALTVIKQGEYLIIANVGDSRAVLATTSDNGTLTPTQLTTDLKPNLPKEAERIMESKGRVFCMEDEPGVYRVWMPNGKTPGLAISRAFGDYCVKDFGLISVPDVTQRKLTSMDQFVILATDGVWDVISNQAAIKIVGSTPNREKAAERLVKCATHEWKRKRKGIAIDDISAICLFFHSASSHATTKVVE 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01804 363 CDD PP2Cc 60 350 IPR001932 -
Tsu07g01804 363 PANTHER PROTEIN PHOSPHATASE 2C 41-RELATED 1 359 - -
Tsu07g01804 363 ProSiteProfiles PPM-type phosphatase domain profile. 61 350 IPR001932 -
Tsu07g01804 363 Pfam Protein phosphatase 2C 72 327 IPR001932 -
Tsu07g01804 363 PANTHER ALPHABET, ISOFORM E-RELATED 1 359 - -
Tsu07g01804 363 SMART PP2C_4 53 348 IPR001932 -
Tsu07g01804 363 SUPERFAMILY PP2C-like 55 351 IPR036457 -
Tsu07g01804 363 Gene3D - 45 353 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01804 Tsu-Chr7 17842808 17844956 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01804 1 351 PP2C-type Phosphatase Gene Family AT3G05640 58.074 5.12e-159 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01804 - - gmx:100817397 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01804 07 17842808 17844956 Tsu07g01804 07 17842808 17844956 ECH