Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01799 ATGGGAcaagaatcaaattacaaaacACAGTTAGTATTAGATATATGCTCCATTTCCAAACGTTCAATTCTATGTGTTCATACACTTTTCTCTAATGCACCTTTCATTGATTGGTATTGCATTCTTGGTGTGGAAGAAAATGCTGTGGTTAACACCATTCGTAAGAATTACCATAAACTTGCTTTGCAACTTCATCCAGATAAGAATGAACACCCTAAGGCTGAAATTGCATTCAAACTTGTTTGTGAGgCATATACATGTCTATCTGATGCTACAAAAAGAAAAGCTTTTAACTTAGAGAGACAAAAGAGCTTTTGCATTAAGTGCAACAAAATCCCATATACATCCACCATTGTCCCTACTAATTCCAATGGTTCAAGTTTCAAGGCATGGAACATTATCAGCAAATCAATATCAAGTAAAGTTAGAAGAAACATTAGAGACATGAGAGAAAGATTCAAGGAAGAAGCTAATGTGATAGAGAATTGTCTAAAGACAAATTATGTGTCAAAGAAAGAATCTCAACATAGAGTTGAGAAAGAAAGTCCTGTTTTCAATCCATCAAATTACAAATACCAAAGTTACCCTCATCCTAGGAACAATGTTTACAAGAATTCCAAGACATTTTGGTACTTGCAGACAGAAAATATGGTGCATAAAGATAAGGGAGGTGCTAAAGCTAAGTATACCTCCCCAATTTTTGAGGTCAAATCAAGTAGCATGGACACAAGAAAATTTGCTTGTGTTTCATCTTAA 756 0.336 MGQESNYKTQLVLDICSISKRSILCVHTLFSNAPFIDWYCILGVEENAVVNTIRKNYHKLALQLHPDKNEHPKAEIAFKLVCEAYTCLSDATKRKAFNLERQKSFCIKCNKIPYTSTIVPTNSNGSSFKAWNIISKSISSKVRRNIRDMRERFKEEANVIENCLKTNYVSKKESQHRVEKESPVFNPSNYKYQSYPHPRNNVYKNSKTFWYLQTENMVHKDKGGAKAKYTSPIFEVKSSSMDTRKFACVSS 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01799 251 ProSiteProfiles dnaJ domain profile. 37 101 IPR001623 -
Tsu07g01799 251 SMART dnaj_3 36 93 IPR001623 -
Tsu07g01799 251 SUPERFAMILY Chaperone J-domain 27 99 IPR036869 -
Tsu07g01799 251 Gene3D DnaJ domain 36 158 IPR036869 -
Tsu07g01799 251 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 240 - -
Tsu07g01799 251 PANTHER BNAC03G44070D PROTEIN 4 240 - -
Tsu07g01799 251 CDD DnaJ 37 90 IPR001623 -
Tsu07g01799 251 Pfam DnaJ domain 37 98 IPR001623 -
Tsu07g01799 251 PRINTS DnaJ domain signature 39 57 IPR001623 -
Tsu07g01799 251 PRINTS DnaJ domain signature 57 72 IPR001623 -
Tsu07g01799 251 PRINTS DnaJ domain signature 73 93 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01799 Tsu-Chr7 17799460 17801148 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01799 23 98 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 39.535 2.17e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01799 - - gmx:100801809 342.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01799 07 17799460 17801148 Tsu07g01799 07 17799460 17801148 ECH
Tsu04g04274 04 50873212 50874571 Tsu07g01799 07 17799460 17801148 PCT