Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01783 ATGGCCTCAAACTTGTGTAGTTGCCGGTGCTTTTTCATCGTCGCCATCTTATCAATCTTCACTTCAACGCCGGCAAAATCTCAGCCACAAACCTCAGATTCATGCAATGGAATATTCCTGTCATACGCCTACAATAGAGGTGTAAAGCTACCACCCAACGTTTCGGATCAGGTGGAGCAACCGTATCGGTTTGAGTCAACACTGACGGTGCTCAACAACGGACTTGTGGAGCTGAAGTCTTGGAAGGTGGTATTCATTGGGTTTCGGCACCAAGAGTGGTTGGTGTCTGCATCCAATGCAATCCTCGCTGACGGGACAAGCATCCCTAGTGCAGTTGGGAACGGGATCATTTTTGCAGGATCTTCAGTAATTGATTTGAAGACAGCAGCAGCAACTGCAGGTGACTTGACGCAGATGCAGGTTCAGGTAGAGATGGTGGGAACAACGTTAGGGGTTGCGCCACCAAGCGTTCCTATGCCTTCTACCATAAACCTTGCTAATGATGGATTCGTTTGCGGTGAACCCACTTCTCAAGGAAACAATGAAACTCATGTATGTTGCAAAAGTGATCCTAATTTCAAGACAAAAAtcacaacaaatgaaaattttctacCTAAACAAAATGGTGATCTTACCATAATGTATGATGTGATCAAAGCATACAATTCTAATTATTGGGCAGAAGTAACAATTTCAAACCATAACACTCTAGGACGTCTTGACAATTGGAAATTAAGCTGGAATTGGACAAATGATGAATTTATACACACAATGAAAGGTGCTTATCCATCAACTATAGATTCTTCTAACTGTATTTTTGGTTCACAAGGTGAATTTTACAAGGAACTTGATTTTTCCAATGTATTGAATTGTGAAAAAAGACCAACAATAATTGATTTACCTCCAACAAGGTTCAATGATACACAACTTGGTAAAGTACCATTTTGTTGTAGGAATGGTACTATATTACCACCATATATGGACCCTAGCATGTCTATTTCAAGGTTCCAAATAAATGTCTTTAAAATGCCACCAAATATCAACCGGTCAAACCTTATACCGCCACAAAATTGGGAGATTAAAGGTGATACGGTTAACCCTGATTACAAATGTGGTGCCCCGATTAGGGTTAGTTCGAGTCAATCTCAAGATCCAACAGGGTTACCTTCAAATATATCTTCAATTGCAAGTTGGCAAGTTGTGTGCAACATAACTACAaagtcattatcaaaaagtgaTTCTCCTAAATGCTGTGTCTCATTTTCAGCTTATTATAATGAATCAGTTATTCCTTGTAATACATGTGCATGTGGATGTCCTAGTAATCAAGAGAGAACATGTAGTGCTAATACACCAGCTATGTGGCTTCCACCAAAAGCACTTCTTGTTCCATTTGAGAATAGAAGTGAAATAGCACATGATTGGGCTAGGTACAAAAAATTACAAGTACCTAACCCTATGCCATGTGGTGATAATTGTGGTGTGAGTATAAATTGGCATGTAAACACAGATGACAAAAAAGGTTGGACTGCAAGGATCACAATTTTTAACTGGGGTGAGACGAATTTCGCCGATTGGTTTGCTGCAGTGCAAATGGACAAAGGTGCACTAGGTTTTAAGGAAATGTATTCATTTAATGGAAGCTTACTAGAGAGATTAAACACTACAATATTCATGCAAGGTAAGAAAGGATTGAACTTTCTTGTAGCGGAAGCAAATGGGTCGAACCCTCGAAGAGATCCGAGGGTGCCTGGGAAACAGCAGTCGgtaattttgtttacaaagaaaaaaaacgatGAAATCAATGTGGCTGGTGGTGATGGTTTTCCTAGTAAAGTGTTCTTCAATGGGGAGGAATGTTCTCTCCCTTCTGTGTATCCAAGCAATGGTTTGAGGAATGAATTTTCCTCGGTCACTATTACGATCTTAATATTGTTGTCAATCATCTTGATGCAACAATGGTGa 1965 0.3893 MASNLCSCRCFFIVAILSIFTSTPAKSQPQTSDSCNGIFLSYAYNRGVKLPPNVSDQVEQPYRFESTLTVLNNGLVELKSWKVVFIGFRHQEWLVSASNAILADGTSIPSAVGNGIIFAGSSVIDLKTAAATAGDLTQMQVQVEMVGTTLGVAPPSVPMPSTINLANDGFVCGEPTSQGNNETHVCCKSDPNFKTKITTNENFLPKQNGDLTIMYDVIKAYNSNYWAEVTISNHNTLGRLDNWKLSWNWTNDEFIHTMKGAYPSTIDSSNCIFGSQGEFYKELDFSNVLNCEKRPTIIDLPPTRFNDTQLGKVPFCCRNGTILPPYMDPSMSISRFQINVFKMPPNINRSNLIPPQNWEIKGDTVNPDYKCGAPIRVSSSQSQDPTGLPSNISSIASWQVVCNITTKSLSKSDSPKCCVSFSAYYNESVIPCNTCACGCPSNQERTCSANTPAMWLPPKALLVPFENRSEIAHDWARYKKLQVPNPMPCGDNCGVSINWHVNTDDKKGWTARITIFNWGETNFADWFAAVQMDKGALGFKEMYSFNGSLLERLNTTIFMQGKKGLNFLVAEANGSNPRRDPRVPGKQQSVILFTKKKNDEINVAGGDGFPSKVFFNGEECSLPSVYPSNGLRNEFSSVTITILILLSIILMQQW 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01783 654 Pfam COBRA-like protein 225 405 IPR006918 GO:0010215|GO:0031225
Tsu07g01783 654 PANTHER COBRA-LIKE PROTEIN 7 1 652 - -
Tsu07g01783 654 PANTHER COBRA-LIKE PROTEIN 7 1 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01783 Tsu-Chr7 17614295 17616413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01783 35 627 COBRA Gene Family AT4G16120 62.248 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01783 - - mtr:MTR_2g034950 1165.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01783 07 17614295 17616413 Tsu07g01783 07 17614295 17616413 ECH
Tsu04g04285 04 50965391 50968026 Tsu07g01783 07 17614295 17616413 PCT