Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01776 ATGAGTGGTAGTTCATCTAATAACCATATGTTAAACAATGAAGAGCAACCTTCCTCATCAACCTTGAAGCTATTTGGTTTTTCATTAACACCATCTAAAACCTTTCcttgtaaaaataagaaattcaTATGCCACTTTTGTCGCCGCGAATTTACCAATTCTCAAGCATTAGGAGGCCATCAAAATGCTCACAAAAGAGAACGCCAAAGAGCACATTTTCTTTCCATTCTTCCACATCATCAACGCTTTGTACCATGTTCACCTTATCATCATATGATAGCACCGCATGGAGCACCAAGAGTAGTGTTTTTGCATCCACGCCGCCGGTCACCGGATGCAATATGGAATACACAACATTATGAAGAGGAGCTTAATGAGAATCCTTTCAATGCAACCACATCCATAGATAATGAATCTTTCATGCAAGTACACAATAATATTATTGATGGTGATGTTGATCTTAACTTGACTCTAGCTTGTGTACCTTTAAATTCCAAGGACAAAGAGTTTGGAAGGGAGTga 522 0.3736 MSGSSSNNHMLNNEEQPSSSTLKLFGFSLTPSKTFPCKNKKFICHFCRREFTNSQALGGHQNAHKRERQRAHFLSILPHHQRFVPCSPYHHMIAPHGAPRVVFLHPRRRSPDAIWNTQHYEEELNENPFNATTSIDNESFMQVHNNIIDGDVDLNLTLACVPLNSKDKEFGRE 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01776 173 SUPERFAMILY beta-beta-alpha zinc fingers 38 69 IPR036236 -
Tsu07g01776 173 ProSiteProfiles Zinc finger C2H2 type domain profile. 42 69 IPR013087 -
Tsu07g01776 173 PANTHER ZINC FINGER PROTEIN 8-LIKE 10 159 - -
Tsu07g01776 173 ProSitePatterns Zinc finger C2H2 type domain signature. 44 64 IPR013087 -
Tsu07g01776 173 PANTHER ZINC FINGER PROTEIN 5 10 159 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01776 Tsu-Chr7 17549304 17549825 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01776 19 103 C2H2 Transcription Factor Family AT1G67030 38.393 7.59e-14 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01776 - - cam:101493460 191.815