Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01774 ATGGGAGTTGAAAAAGAAGGGACTAAAAGTGGAGGTAGTTTTTTCCACTTGTTTGATTGGACCTCGAAATCGCGTAAGAAATTATTTGCATCTAAGTCAGATTTACCAGAGTCTTTGAAACATGAAAGAAAATCCAATCACAATGTCGCAATGAGACATCCGTATCTGGTCGATGATGACGAAAATGGTGTAGGGGAATATGTTAGAGGAAGTTGTGATCATAGTTATGCATCATCTGTTACGAGTGATGATACATGTGGAACAAGAGCTCCTAATGTAGTTGCAAGGCTTATGGGATTGGATTCTTTGCCTTCTTCCGGTTTCTCTGATCCTTACTCGACGCCATATTATGATACAAGATCCCTTCAAGATTCTCAGTTTCTATATTCTGGAAAGTTGGTTGAAAAAGTTGAAGGATCGTCTAGCAACTTCGTGGAGCCAAAGCCTCAAAAGGTTATTACAAGGCCAATTGAAAAGTTTCAAAGAGAAGTGTTGCCTCCGAAATCTGCTAAATCAATTCCTGTTACACACCATAAACTTTTGTCCCCTATTAAGAATCCCGGCTTTGTTCCATCCAACAATGCTGCTTATATAATGGAGGCTGCAGCAAGAATTATTGAACCTGGATCCTCCCAAGCAAAGGCTAAAACACATATGGCGGCATCATCGATAGTCTCACTGAGGGTAAAAGATGTTAGAGATAAATTGGATTCTTCGCAAAAGGCACCTCTAATTGTGACATCTTCCGTAGCTTTTAGGACTCGAGagctaaaagaaaaaagagatatTTCTCAAAGGACAAGCCGGGTTTCAGAACGTTCTCAAAGATCATCAGTCGAGTCGAATGCTGCAAAGTTTTTAAAGGGACAATCTTTGAACAGAAGCTGGAATGGAACCGCGGAAACATCAGTTAAGTCTCCTACACATGCAGAAGAAGATTCTTCTTTGAAGAATAAAGGGAAGTCTGTTTCGTCTGCGGAAACATCCGTGAAGTCTCCTACACATTCAGAAGAAGATTCTACTTTGAAGAATAAAGGGAAGTCTGTTTCGCTTGCAATCCAAGCAAAGGTGAATGTTCAAAGAAGGGAAGGTTTGAGTTCGACCGGTGGCAGAAACTTGATGGGCCAAAAAGAGCATATCGACACTAAATCCAATCAGCCACTACCTAAGGCAAATGCTCAGAAAAATTTGCATCGGAAATCTTCTGGCCAGAATTCTTCTAATGTTCTGAGGCAGAATAATCTCAAACAGAACCATTCAATTGATAATAACGACAAATTAGCACCATCTAAGCCATTGGTTTCCAATTCACAAGGTAGAAAAGTTACGAATGGAGATTCCCCTTATGGACGACACAGAAGCTCTAGTAGTAAATCCGCTGCAAAATCTAAAGTTGGATCGAGAAAGTCTGCCGTGGAGGTGACAGATAGCGAAAACGAAATTCTATACACCAGCACAAACAATTTTCCTAGAAAGAAAAGGACTACGGACAAGGACTGGAACGATAGAGTTGTCGATAATTTGTTCATCGACAAAACTCCAAAGTCTGTTAAGCCGAATCTATCTAGTAATAAACAATATGGTTGGTCTGAAGAAGTGAAAAAGAAAGACATGGATGTAGTTTCCTTCACATTTACTACACCATTAACAAGGAACAGCAATCCAGGTTCTGAGACACCTCGACAAGATGGAAAGAATACTAATGATCTTTCATTGGATCAACGCATCAAAAGAGTGTTGCTCGATGCAGACAATACAAGGTCTCCAATAGGATACAATGTAATTGGTGGTGATGCCTTAGGTATTCTTTTAGAACAGAAGTTGAAGGAATTGAGTCAATTGACAAGTGGAGTTGAAATCTCTTCCATCACGGCACCAAAGTCAAATGATCAAGTAACCAACTTCAATATTGTTAATCTCAATCCAAGATTGGAGCAGAAGAAAGATCAAGATATGTCATTTACAGAAAGCTTAAGTGGTAGCCGTGGTTCTGACATGTCCTTCACCAATCTTTCAGAATCATCCTTGAAACATAAATCATGGGGTGATGAGATGGAACCATTGTCATTCAATTGCCGACAACCAAGTCCAATCTCAGTTCTCGAGCCTTCTTTTTCGATCGAAAGCTGTGAATCTTCGATGAGCGCAGATGTTACTAGTACAGAAGGAAGCAAAATGTTTTTGTCTCTTCAAGCTCAAGAAATCCATGGCTTTAATTTTTCAAGGAAGTTCTATCCTACTGAATGTGATGCAGAGTTATCTGACTCAGCTTCTTCAACATCAACTAGGACTATGATGAAGAAGCAGAATAGTACATTTTCTGCCATGAAGTTTGGTAGATCATCAAGTACATGGGAGCTAGACTATGTGAAAGAGATACTGTCTAATGTCGAGTTGATGTATATGGATTTTTCACTCGGCCGAACTCGCGAGGTTGTCAACTCTCATCTTTTCAACCAGTTGGAAAGCCGAAAGGGAGGTTTCAAGAGTGACGATGAATCAAGAATAGAAAGGAAAGTTATATTTGATTGTGTGAGTGAATGTTTGGATTTGAGATGCAAAAGTTATGTAGGAGGAGGATACAAAATGTGGATTAAAGGGTTTGAAATGGTGAGAAGAAAAGATTGGTTGGCAAAAGATGTGTACAAGGAAATTTTGGGATGGAAAGAGATGAGGGATTCAATGGTTGATGAACTTGTGGACAAGGATATGAGTAGCCAATTTGGAAATTGGTTGGATTATGAGATTGATGCTTATGATTTTGGAGAAGAAGTTGCTGATCATATATTTAATTCTTTGGTTGATGATGTTGTCTATGATATGTTGCAATTTTAA 2835 0.3901 MGVEKEGTKSGGSFFHLFDWTSKSRKKLFASKSDLPESLKHERKSNHNVAMRHPYLVDDDENGVGEYVRGSCDHSYASSVTSDDTCGTRAPNVVARLMGLDSLPSSGFSDPYSTPYYDTRSLQDSQFLYSGKLVEKVEGSSSNFVEPKPQKVITRPIEKFQREVLPPKSAKSIPVTHHKLLSPIKNPGFVPSNNAAYIMEAAARIIEPGSSQAKAKTHMAASSIVSLRVKDVRDKLDSSQKAPLIVTSSVAFRTRELKEKRDISQRTSRVSERSQRSSVESNAAKFLKGQSLNRSWNGTAETSVKSPTHAEEDSSLKNKGKSVSSAETSVKSPTHSEEDSTLKNKGKSVSLAIQAKVNVQRREGLSSTGGRNLMGQKEHIDTKSNQPLPKANAQKNLHRKSSGQNSSNVLRQNNLKQNHSIDNNDKLAPSKPLVSNSQGRKVTNGDSPYGRHRSSSSKSAAKSKVGSRKSAVEVTDSENEILYTSTNNFPRKKRTTDKDWNDRVVDNLFIDKTPKSVKPNLSSNKQYGWSEEVKKKDMDVVSFTFTTPLTRNSNPGSETPRQDGKNTNDLSLDQRIKRVLLDADNTRSPIGYNVIGGDALGILLEQKLKELSQLTSGVEISSITAPKSNDQVTNFNIVNLNPRLEQKKDQDMSFTESLSGSRGSDMSFTNLSESSLKHKSWGDEMEPLSFNCRQPSPISVLEPSFSIESCESSMSADVTSTEGSKMFLSLQAQEIHGFNFSRKFYPTECDAELSDSASSTSTRTMMKKQNSTFSAMKFGRSSSTWELDYVKEILSNVELMYMDFSLGRTREVVNSHLFNQLESRKGGFKSDDESRIERKVIFDCVSECLDLRCKSYVGGGYKMWIKGFEMVRRKDWLAKDVYKEILGWKEMRDSMVDELVDKDMSSQFGNWLDYEIDAYDFGEEVADHIFNSLVDDVVYDMLQF 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01774 944 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 326 942 - -
Tsu07g01774 944 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 238 326 - -
Tsu07g01774 944 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 241 - -
Tsu07g01774 944 MobiDBLite consensus disorder prediction 360 475 - -
Tsu07g01774 944 MobiDBLite consensus disorder prediction 360 464 - -
Tsu07g01774 944 Pfam Domain of unknown function (DUF4378) 786 936 IPR025486 -
Tsu07g01774 944 MobiDBLite consensus disorder prediction 546 567 - -
Tsu07g01774 944 MobiDBLite consensus disorder prediction 270 305 - -
Tsu07g01774 944 Pfam DUF761-associated sequence motif 78 109 IPR032795 -
Tsu07g01774 944 PANTHER EXPRESSED PROTEIN 326 942 - -
Tsu07g01774 944 PANTHER EXPRESSED PROTEIN 1 241 - -
Tsu07g01774 944 PANTHER EXPRESSED PROTEIN 238 326 - -
Tsu07g01774 944 MobiDBLite consensus disorder prediction 546 570 - -
Tsu07g01774 944 MobiDBLite consensus disorder prediction 257 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01774 Tsu-Chr7 17517540 17522390 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01774 12 942 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 31.165 6.90e-92 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01774 - - gmx:102669513 1260.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01774 07 17517540 17522390 Tsu07g01774 07 17517540 17522390 ECH