Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01757 ATGTCTGTTTTTGCATCTTTCATTTGCAGTGATTTTCCACAAACACTTCAACTCTCAAAACCCATAAAGATGAAAACTTTCTCTTCAATTCAACCACCCCATTATTTCCATTTCTCACCATTTTTCTCTTCCACTTCTATAAGATTTTGCATCAGGACTCAAGTTCCTTTCTCTACAAAGGTCTTCTTTTGTCAGGCAAAATCTGGCACAAATGAGTCATTAAACATAAAAGTCTTGCCTCCAACTCTATTAGTAGCCGAAAAAGAAGAAGCCAAGGCTGTATTAACCTTGTTTTTGAAGAAACGAGGTTTGAGCAATGCAAATGCAGCAAGAACCATCAATAAGTCGGATCCTTTTATCGATCACCTTCTCTCAAAGCTTcactctaaacacaaaatttGGTACCTTTCAGGTAGAGAGCTTACAACTCTCGAGATCAGGGATGCTCTTATCTCTTATCTTGAGTCGCTTTTCGAGGAGCATGGAGACGTTCTAATTGATCTAGTGGAAAACTATCCAAACCCACCACCAGTTAAGGATAAATCAGCCGTGCCGATTACCCCTACTGGTTCAGTGGTAGACTCTAAGAAGCTTAAAGCTGTGTCTACAGTGAGTGGTATAGACCCTGCTGCGGGAAATCTTCGCCCTCATATTGTTTATCTTATGGAATTTGGAATGGATAGTGATCAGATTAGGATTATTATGCGACGATTCCCGGCTTTTGCCTACTATAGTTTAGAGGGTAAAATTAAGCCATTGGTTGAGTTTTTTCTTGAACTTGGAGTGCCGAAAGAACAAATTCCTATTATCCTCACTAAAAGGCCTCAATTATGTGGAATCAGTCTATCTGAAAATCTTAAGCCCACCATGAAATTCTTCGAATCTTTGGGCGTCGACAAGACACAATGGGCGAAGGTGATCTACCGCTTCCCGGCCTTGCTAACTTATAGCAGGCAGAAGATTAATGAAAGTGTAGATTTTCTCCGTGAATTAGGCATCTCAGACGAGAGCATAGGTAAGATTTTAACTCGTTGCCCTAATATTGTTAGTTACAGTGTAGAGGACAATCTCCGACCGACAGCAACATACTTCCGTTCTTTAGGGGTTGATGTCGGTGCTCTTTTGTTCAGGTGTCCGCAAAATTTCGGTCTTAGCATTGAGGCAAATATAAAGCCTGTAACAGAATTTTTCTTGGAAAGGGGATATACTTTACAAGAAATTGGGACTATGATTACGAGATATGGAATGTTGTACACTTTCAGCTTGACTGCAAATATGATGCCAAAATGGGATTATTTTATGACTATGGATTACCCGAAATCCGAGCTGGTTAAATTCCCTCAATTTTTTGGATACAGTTTAGAACAAAGGATTAAACCGAGATATGCACGCGTGAAAGATGCCGGTGTGAGATTACTGTTGAATCAGGTTCTTTCACTGTCAAGTAGCAACTTTGAAGAggtattaaaaaagaaaataaagaaattgcAAAATGATTAG 1500 0.386 MSVFASFICSDFPQTLQLSKPIKMKTFSSIQPPHYFHFSPFFSSTSIRFCIRTQVPFSTKVFFCQAKSGTNESLNIKVLPPTLLVAEKEEAKAVLTLFLKKRGLSNANAARTINKSDPFIDHLLSKLHSKHKIWYLSGRELTTLEIRDALISYLESLFEEHGDVLIDLVENYPNPPPVKDKSAVPITPTGSVVDSKKLKAVSTVSGIDPAAGNLRPHIVYLMEFGMDSDQIRIIMRRFPAFAYYSLEGKIKPLVEFFLELGVPKEQIPIILTKRPQLCGISLSENLKPTMKFFESLGVDKTQWAKVIYRFPALLTYSRQKINESVDFLRELGISDESIGKILTRCPNIVSYSVEDNLRPTATYFRSLGVDVGALLFRCPQNFGLSIEANIKPVTEFFLERGYTLQEIGTMITRYGMLYTFSLTANMMPKWDYFMTMDYPKSELVKFPQFFGYSLEQRIKPRYARVKDAGVRLLLNQVLSLSSSNFEEVLKKKIKKLQND 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01757 499 SMART mt_12 408 439 IPR003690 GO:0003690|GO:0006355
Tsu07g01757 499 SMART mt_12 232 263 IPR003690 GO:0003690|GO:0006355
Tsu07g01757 499 SMART mt_12 440 471 IPR003690 GO:0003690|GO:0006355
Tsu07g01757 499 SMART mt_12 268 299 IPR003690 GO:0003690|GO:0006355
Tsu07g01757 499 SMART mt_12 304 334 IPR003690 GO:0003690|GO:0006355
Tsu07g01757 499 SMART mt_12 195 227 IPR003690 GO:0003690|GO:0006355
Tsu07g01757 499 SMART mt_12 339 370 IPR003690 GO:0003690|GO:0006355
Tsu07g01757 499 SMART mt_12 372 403 IPR003690 GO:0003690|GO:0006355
Tsu07g01757 499 Gene3D Transcription termination factor 3, mitochondrial 274 495 IPR038538 -
Tsu07g01757 499 PANTHER CGI-12 PROTEIN-RELATED 50 497 IPR003690 GO:0003690|GO:0006355
Tsu07g01757 499 Pfam mTERF 317 486 IPR003690 GO:0003690|GO:0006355
Tsu07g01757 499 Pfam mTERF 217 399 IPR003690 GO:0003690|GO:0006355
Tsu07g01757 499 Pfam mTERF 192 328 IPR003690 GO:0003690|GO:0006355
Tsu07g01757 499 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF5, CHLOROPLASTIC 50 497 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Tsu07g01757 mTERF 1.5e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01757 K15032 K12177 gmx:100781900 733.791