Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01756 ATGAGAGACATGTATGAAAAACAATCATCATCACCTGAAGTTTCAAATTATGCATCAAGTAGCGGCTTGTCCGGAGACGATAAAGAGATTGGTTATAGAGCTACAACATCAAATCATCCGTATCTTTTGTCCAAAATGTCTCTTCACAACTTACCCAACAAAATTGACCTCAATTTTGCTCGAATGGTAATGGCAGAGGTGGTGGGTACTTTTATATTGATGTTTTGTGTATGTGGAATCATTGCAAGCACACAACATCAAAATAATGCAGTAGGACTTCTGGAGTATGCAGCAACAGCAGGATTAACAGTGGTTGTGATAATTTTCTCTATAGGCCCAATTTCTTGTGCACATGTTAACCCAGCTGTTACAATAGCCTTTGCAACAATCGGTCAATTTCCATGGTTCAAGGTACCAATTTACATAATAGCACAAACAATTGGTTCTTTGATGGCAACATATATTGGTAGCCTTATCTATGGCATAAAATCAGATATTATGATGACTCAACCACTCCAAGGTTCTAACTCTGCCTTTTGGGTGGAGCTTATTGCAACATTCATCATAATGTTTTTGGTTACAGCTTTGACATCTGAACCTCAATCAGTGGGTCATTTATCTGGGTTTGTTGCTGGAATTGCAATTGGGCTTGCTGTACTAATCACAGGCCCTGTTTCAGGTGGATCAATGAATCCAGCAAGATCACTAGGTCCAGCAATTATGTCATGGAAATTTAAGGGCATTTGGATATATATTCTAGCCCCAATTGGAGGAGCTGTGGCAGGAGCTCTAACATTTCGTTTCCTACGTCTTCAAGACCAACATTGCAATTCCACAAACATAAGTGAAGCTGGTCATCCCATACCCTATTGTGCAAGAAGAAGTGGGACCATGATTTTGCTGGTAGAGAAAAATTGGAGTGTATTATGTGACAAGATAGAAGGGTTTAGACAAAGATATGTCTTAAGAACAAGTGTATCAGATGGTGTTTATCATAAGTTGTCACTGTAA 1011 0.3897 MRDMYEKQSSSPEVSNYASSSGLSGDDKEIGYRATTSNHPYLLSKMSLHNLPNKIDLNFARMVMAEVVGTFILMFCVCGIIASTQHQNNAVGLLEYAATAGLTVVVIIFSIGPISCAHVNPAVTIAFATIGQFPWFKVPIYIIAQTIGSLMATYIGSLIYGIKSDIMMTQPLQGSNSAFWVELIATFIIMFLVTALTSEPQSVGHLSGFVAGIAIGLAVLITGPVSGGSMNPARSLGPAIMSWKFKGIWIYILAPIGGAVAGALTFRFLRLQDQHCNSTNISEAGHPIPYCARRSGTMILLVEKNWSVLCDKIEGFRQRYVLRTSVSDGVYHKLSL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01756 336 MobiDBLite consensus disorder prediction 8 23 - -
Tsu07g01756 336 MobiDBLite consensus disorder prediction 1 24 - -
Tsu07g01756 336 ProSitePatterns MIP family signature. 118 126 IPR022357 -
Tsu07g01756 336 PRINTS Major intrinsic protein family signature 249 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu07g01756 336 PRINTS Major intrinsic protein family signature 61 80 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu07g01756 336 PRINTS Major intrinsic protein family signature 212 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu07g01756 336 PRINTS Major intrinsic protein family signature 137 156 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu07g01756 336 PRINTS Major intrinsic protein family signature 181 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu07g01756 336 PRINTS Major intrinsic protein family signature 100 124 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu07g01756 336 PANTHER AQUAPORIN NIP7-1-RELATED 11 282 - -
Tsu07g01756 336 SUPERFAMILY Aquaporin-like 57 274 IPR023271 -
Tsu07g01756 336 Pfam Major intrinsic protein 58 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu07g01756 336 Gene3D Glycerol uptake facilitator protein. 27 283 IPR023271 -
Tsu07g01756 336 PANTHER AQUAPORIN NIP2-1 11 282 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01756 Tsu-Chr7 17320346 17323869 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01756 61 274 Major Intrinsic Protein MIP AT5G37820 39.535 6.00e-53 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01756 K09874 - mtr:MTR_1g070385 520.39