Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01738 ATGGAAAACTTGTGCAATTTTGGTGAGATCAGTTTCAGTGCAATTGAGGACAAACTTAGTTCATCCAATGATACTTTCTGGCATACAAAGAAAGTTACTGAAATGAAAAATGTTCAATTTTCTTTAGCAGAAGATCAAGGAAACTATAATGGCATTGGTTCTCTTTgttctaatttttgtttctttcaagaTGATCCATCACAAGAAGAAGAGTTACTTTTTCCCACTAATCAACAAAagtttcatcatcaacaaaaatcATATCAAGATCATGAACCTCTTGATAATCTACAATTTGATATGGTTCAATTTGATGAACAGTTTGAAACCAAAAAACTTCCACTTTGTGACacaaaaaaggacaaacaataTTTCCAAAATACCCCTTTAGCTGCACCAGTTGAAATATTGAAGAATTATGGCAAAGGATTCAAGAGGTTATTACCTGATGAAGGAAAAATTCTTCATCCTGTCAATGATTTTGGTTTAGTTACAGATAATGATAACGAGAGAAAGTTGTCGACCGCAGATATCATGAAGATAGCTGGAACTAAGTTCATacaatcatcatcttcatcagagTCGGCATCAGGTTTGATTCTTAATCACCcttttggtttttctttctCCGGTCTATCCGATGAAGAGAAAGATGATATTTCACTTGCTGAATCACTCTTAGCTTGTGCTGAGAAAGTTGGATATCAACAATTTGAACGTGCGAGAAAACTGTTATCGCAAATTGAGTCTTTATCTTCGAAGACAGGTAACCCGGTTAAGCGTGTGGTTTATTATTTTGCCGAAGCTCTTCGCCAGAGAATCGACAGAGAAACAGGTAGAGTATCTATCAACAATATGCAAAAGAAGGAATCTTTATTTGATCCTGAAGTGGAAACCAAGGATCTAACTCCGACCCTTGTCGCGTTTATTGAAGATCTTCCATTTTGTAAAGTTTCAATGTTCCCATGTGTACAAGCTTTAATAGAAAATGTAACTGATGCAAAGAAGATTCATGTTATTGATCTCGCAATTCGAAAAGGGTTACAGTGGACAATCTTAATGCAAGCACTTCAATCGAGAAGCGAATGTCCACTCGAGCTTCTAAAGATAACAGCTATTTCGAGCGGAAACACAGACACTTCAAAGCTTGTAGTCGAGGACACTGGTAAGAGATTGAAGGATTTTGCACAAAGTTTGAACATACCATTTTCGTTCGATACAGTTATTGTGTCTGATTTGTTACATCTAAGAGAAGATCATTTTAAGATAGATTCAGACGAAACGGTTGCAGTTTATTCTCAATTTGCACTTCGATGCAAGATTCAACAATCCGACCAACTTGAAACAGTCATGAGAGTGATTAGAACTATAAATCCTAGAGTAATGGTTGTCGCCGAGATTGAAGCAAATCATAATTCTAAATCTTTTGTTAACCGTTTCATCGAAGCACTTTTCTACTTTAGTGCATTTTTCGATTGTTTAGAGGATTGTATGAAAGGCGACGAGAAAAACAGAATGATTATAGAATCAATGTATTTTAGTCATGGTATAAGAAATAATGTAGCTGAAGAAGGAGCTGAAAGAAAGAGTAGAAATGTGAAGATTGATGTGTGGAGAGCATTTTTCACAAGATTTGGTATGGTGGAGACAGAATTGAGTATGATGTCTTTGTATCAAGCTGAATTAGTTGCTAAAAGATTTCCTTGTGGAAGTTCTTGCACATTTGATATGAATGGACATTGTCTTATTGTTGGATGGAAAGGAACACCAATTATTTCTGTTTCTGTTTggaaattcatttga 1803 0.335 MENLCNFGEISFSAIEDKLSSSNDTFWHTKKVTEMKNVQFSLAEDQGNYNGIGSLCSNFCFFQDDPSQEEELLFPTNQQKFHHQQKSYQDHEPLDNLQFDMVQFDEQFETKKLPLCDTKKDKQYFQNTPLAAPVEILKNYGKGFKRLLPDEGKILHPVNDFGLVTDNDNERKLSTADIMKIAGTKFIQSSSSSESASGLILNHPFGFSFSGLSDEEKDDISLAESLLACAEKVGYQQFERARKLLSQIESLSSKTGNPVKRVVYYFAEALRQRIDRETGRVSINNMQKKESLFDPEVETKDLTPTLVAFIEDLPFCKVSMFPCVQALIENVTDAKKIHVIDLAIRKGLQWTILMQALQSRSECPLELLKITAISSGNTDTSKLVVEDTGKRLKDFAQSLNIPFSFDTVIVSDLLHLREDHFKIDSDETVAVYSQFALRCKIQQSDQLETVMRVIRTINPRVMVVAEIEANHNSKSFVNRFIEALFYFSAFFDCLEDCMKGDEKNRMIIESMYFSHGIRNNVAEEGAERKSRNVKIDVWRAFFTRFGMVETELSMMSLYQAELVAKRFPCGSSCTFDMNGHCLIVGWKGTPIISVSVWKFI 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01738 600 Pfam GRAS domain family 223 598 IPR005202 -
Tsu07g01738 600 ProSiteProfiles GRAS family profile. 213 598 IPR005202 -
Tsu07g01738 600 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 41 598 - -
Tsu07g01738 600 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 41 598 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01738 Tsu-Chr7 17086287 17088089 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01738 212 599 GRAS Transcription Factor Family AT3G03450 31.298 8.57e-59 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tsu07g01738 GRAS 2.5e-93 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01738 - - gmx:100798926 746.117