Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01731 ATGTATGATGGCATCGAAGATTTTCTATGCAGTGATAACAACATCATGCCTATAAGGTACTCTTACAAAGACATCAAAAAGATAACCGAACAATTCAAGATAAAACTTGGTAACGGGGGTTATGGATCTGTTTTCAAAGGAAAGCTTCGAAGTGGCCGTCTATTGGACAAAGCAAAGTCCAACGGTCAAGATTTTGTTAATGAAGTTGCTACAATAGGCAGGATTCACCATGTTAACGTGGTACAACTTATTGGTTTTTGTGTGGAGGATTCAAAACGTGCTCTTATATATGAATTCATGCCGAATGGATCACttgaaaaatacatattttctcATAATGACGAGAGTAATTCCTTGAGTTGTGAAAAATTGTATGACATTTCTCTTGGCGTGGTTAGAGGCATTGAGTATTTGCATAATGGATGTAATATAAAAATTCTACACTTTGATATAAAACCTCACAATATCCTTcttgatgaaaattttaatcCAAAAGTTTCTGATTTTGGACTAGCTAGGCTTTCTCCTTCCGTTAAAAGCATTGTGTCATTAACTGCAGCAAGAGGAACCATCGGATACATGGCCCCTGAACTATTCTACAGAAATATCGGCGCAATATCTTACAAAGCTGATGTTTATAGCTTTGGGATGTTGTTGATGGAGATGGCAAGTAGAAGGAAGAACTTGAACGTGCTGGCTGAGCAATCTAGCAAAATTTATTTCCCATTTTGGATTTATGATCAGTTACATGATGGAAGGGAAgtaacaattgagaatgacacAATTCTGGAAATGAAATTGGCAAAGAAAATGATGATTGTGGCTTTGAGGTGTATACAGACAAAACCAAACGATCGTCCTTCAATGGATAAAGTGTTGGAGATGCTCGAAGAAGAGGACAGGGACTTGCAAATTCCTAATAAGCCTTACTTCTATCCACAAGATCAGCCTGTAGCAAATGTTGGAGATGATGATATTAGCAGCTCATGGTCCTCCTATGGCAAGTGA 1008 0.3601 MYDGIEDFLCSDNNIMPIRYSYKDIKKITEQFKIKLGNGGYGSVFKGKLRSGRLLDKAKSNGQDFVNEVATIGRIHHVNVVQLIGFCVEDSKRALIYEFMPNGSLEKYIFSHNDESNSLSCEKLYDISLGVVRGIEYLHNGCNIKILHFDIKPHNILLDENFNPKVSDFGLARLSPSVKSIVSLTAARGTIGYMAPELFYRNIGAISYKADVYSFGMLLMEMASRRKNLNVLAEQSSKIYFPFWIYDQLHDGREVTIENDTILEMKLAKKMMIVALRCIQTKPNDRPSMDKVLEMLEEEDRDLQIPNKPYFYPQDQPVANVGDDDISSSWSSYGK 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01731 335 MobiDBLite consensus disorder prediction 312 335 - -
Tsu07g01731 335 PANTHER INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1, PUTATIVE-RELATED 1 311 - -
Tsu07g01731 335 SUPERFAMILY Protein kinase-like (PK-like) 13 297 IPR011009 -
Tsu07g01731 335 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 311 IPR045874 GO:0004672
Tsu07g01731 335 Gene3D Transferase(Phosphotransferase) domain 1 100 307 - -
Tsu07g01731 335 Pfam Protein kinase domain 34 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01731 335 ProSiteProfiles Protein kinase domain profile. 30 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01731 335 MobiDBLite consensus disorder prediction 321 335 - -
Tsu07g01731 335 Gene3D Phosphorylase Kinase; domain 1 10 99 - -
Tsu07g01731 335 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Tsu07g01731 335 SMART serkin_6 30 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01731 Tsu-Chr7 17035057 17036064 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01731 19 329 Receptor kinase-like Gene Family AT5G38280 48.287 1.53e-102 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tsu07g01731 Pkinase 4.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01731 - - mtr:MTR_1g031200 576.63