Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01728 ATGTTTAATGTTTCAATATTTACTTCGGATTATGTTCCAAACATAAACCTTCTTCGTTTGAAGTGGCTTGCGCCTAATTGTAAAGACTGTGAATCGAAAGGAAAAATATGTAGTTGGAAGAATAGCACTACTAATACCAACAAGGAAGTATATTGTTTCGTCAAAAACAAACAAGGTAACTTATCTTACAATTTCAAGTTCGTAAATGCAGGGTCAATTCTAGGTTCGTTGTTTTTTGTCTTATTGGTTAGTGcgatttatcatatttatgaCTCTTATGTATTGAAGAAAGCAAAACAAGCAATTATAGAAAAGTTTGTAGAAGACTATAAAGCTCTTAAGCCTACGAGATACTCTTATGTAGAAATTAAGAGAATCACGAATAATTTTGGAGAAAAGTTAGGAGAAGGAGCCTATGGTAATGTGTATAAAGGATGCATTTCAAAAGAATTCAGCGTTGCCGTGAAGATACTCAATGTTGCTGAAGGAAATGGGCAAGAATTTCTCAATGAAGTTGGTACAATGGGTAGAATCCACCATGTTAATATTGTTCGATTGATCGGCTTTTGTGCTGATGGCTTTAAAAGAGCTctaatttatgaatttttaccAAATGATTCGCTGCAGAAGTTCATAAATTCACGAGAAAACAAGAATAACTTCCTTGGTTGGAAAAAATTGCAAGAAATTGCTTTAGGAATAGCTAAAGGAATTGAGTATCTTCATCAAGGTTGTGATCAACGCATCCTCCATTTCGATATCAAACCACAAAATGTACATGTTACTTGA 789 0.3257 MFNVSIFTSDYVPNINLLRLKWLAPNCKDCESKGKICSWKNSTTNTNKEVYCFVKNKQGNLSYNFKFVNAGSILGSLFFVLLVSAIYHIYDSYVLKKAKQAIIEKFVEDYKALKPTRYSYVEIKRITNNFGEKLGEGAYGNVYKGCISKEFSVAVKILNVAEGNGQEFLNEVGTMGRIHHVNIVRLIGFCADGFKRALIYEFLPNDSLQKFINSRENKNNFLGWKKLQEIALGIAKGIEYLHQGCDQRILHFDIKPQNVHVT 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01728 262 ProSiteProfiles Protein kinase domain profile. 128 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01728 262 Gene3D Transferase(Phosphotransferase) domain 1 203 262 - -
Tsu07g01728 262 Gene3D Phosphorylase Kinase; domain 1 101 202 - -
Tsu07g01728 262 Pfam Protein kinase domain 131 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01728 262 SMART serkin_6 128 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01728 262 PANTHER RUST RESISTANCE KINASE LR10-RELATED 3 259 IPR045874 GO:0004672
Tsu07g01728 262 SUPERFAMILY Protein kinase-like (PK-like) 112 260 IPR011009 -
Tsu07g01728 262 ProSitePatterns Protein kinases ATP-binding region signature. 134 156 IPR017441 GO:0005524
Tsu07g01728 262 PANTHER RECEPTOR-LIKE KINASE 3 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01728 Tsu-Chr7 17017859 17018647 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01728 26 259 Receptor kinase-like Gene Family AT1G66910 39.918 1.14e-52 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tsu07g01728 Pkinase 5.3e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01728 - - mtr:MTR_1g031540 399.823