Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01719 ATGGAAACTCCAGAACCAGAAGGTGAACTTCTCAAGAAAATTGAAAGACTTGAAGCTGGTCAAGTTCATCTCAAGCAAGAAATGTCAAAGCTTAAACTTTCTCAACGTAGAAGGTCTCATTCAGTTTCACCACAACGTTCAAGATTAGGTGCTTCTGCTTCTGGTCCTTCTTCTTCTGCTTCTGCAAATAAGTATAACAAAGGCTCTTCTTCACCTCTTCAAAGAGAAAGTCGTTCAAGTCATGATCCTCTTCATCAAAATGGTGGCAAGTATCTCAATATTTTGCAATCAATTGGTCATTCTGTTCATATATTGGATCTTCAATGTCGTATTATATACTGGAACCCTAGTGCTGAAAATCTGTATGGTTATACAGCAGAAGAAGCTCTTGGTCATGATGTGATTGAGATGCTTGTAGACCCTAGTGAATTTGGCTTAGCCAGTGATATAATCAACCGCGTGAAAATGGGAGAAAGTTGGACTGGTCAATTTCCTGTTAAGAATAAGATGGGGGATAGGTTTGTAGTTGTTGCAACCAATACACCTTtctatgatgatgatggaagCTTGATTGGTGTTATTTGTGCCTCAAGTGATTCGAGACCTTTCCTTGAAAACATAGTTCCTTTTTCAGTTGGAAAGAATGAAGCAAAGGATTCAGGTGTTAATTTTCCTAGAAATGCCATTACAAATAAACTCGGCCTTGATCCTCAGCAGCCACTTCAAAATGCTTTAGCGTCGAAAATCTCGAATTTGGCTACAAAGGTGAGTAACAAAGTCAAGTCCAAAATCCGGACTCGAGAAAATGGTGTTGGTGGAGAAGGAGGGAGCGGAGAGAGTCATCATTCTGAGCATGGTTTCTCGGATTATGGTCATTCTGATCAGAGAGAGGATGGCGCTAATTCCAGTGGAGCTAGCACACCCGCTGGAGAGGTGCCTCCGACTCCTTTTGGTTCATTTACTCATGTCGAAGAGAAATCCCAAGGGAAAACTATGAGGAACTCTAGCGATGAGAGTGAAGAAAAACCTATACACAAAATCATAACTTCTAAGGCTGAAGCATGGATTCAAAAGAAAACTATGTCATGGCCATGGAAAGCAAATGATCGGGAAGAATCCGAGTCAAAGAACGTTCGTGTTTCTTGGCCTTGGATGCAGGGTGATCAAGAAAAAGGGTCAACTAATCAGAAGAATCTGTCATCTGGATTGAAGCCGCCAGAAAGCCGGGCTGCTGAAAGTTACCAACATGTTCAAAATGAGGCTTCAGGAGGATCCTGGTCCTCCTTCAATGTTAACAGCACAAGTAGTACCAGCAGTTGTGGGAGTGGCAGCGGTAGTAGTTCTGCTGCTAATAATAGAGTGGATGTTGATTCTGATTGTTTAGATTACGAAATTTTGTGGGAGGACCTTACAATTGGAGAGTCTATTGGACAAGGTTCTTGTGGAACTGTATACCATGCTCTGTGGTATGGATCAGATGTTGCTGTAAAGGTTTTCTCAAAGCAAGAATATTCAGAAGATCTAATACAGTCCTTCAGACAAGAGGTGTCTCTCATGAAAAGACTTCGCCATCCAAATATTCTACTCTTTATGGGCGCAGTAACTTCACCTCAGCGTCTATGCATTGTAACAGAGTTTCTACCACGCGGAAGTTTATTTCGTTTGCTTCAGAGAAACACATCCAAACCTGATTGGAGACGGAGAGTTCACATGGCTTTAGATATTGCACGAGGTGTAAATTATCTTCATCACTGCAACCCCCCTATCATCCATCGAGATTTGAAGACTTCGAATCTTCTAGTTGATAAGAATTGGACTGTGAAGGTCGGTGATTTTGGTCTTTCACGTATCAAACATGAAACCTATCTCGAGACTAAAACTGGAAAAGGCACGCCTCAATGGATGGCACCAGAAGTTCTTCGTAACGAACCCTCAAATGAGAAGTCCGATGTTTACAGCTTCGGGGTGATTATGTGGGAACTTGCAACTGAAAAAATCCCTTGGGATACTCTGAATGCAATGCAGGTTATCGGAGCTGTAGGGTTCATGAACCACCGGCTAGAAATTCCGGAAGATATTGATCCACAGTGGGCTTCTATAATCGAGAGTTGTTGGCATACTGATCCGGCTAGTCGACCAACATTTCAAGAACTGCTGGAAAGGCTTAAAGAACTTCAGCGACGCTACGCCATTCAGTTCCAAGCAGCCAGATCTGCTGTTGGGGAAAACACTCAAAGGAGTCCTAGCTGA 2250 0.4213 METPEPEGELLKKIERLEAGQVHLKQEMSKLKLSQRRRSHSVSPQRSRLGASASGPSSSASANKYNKGSSSPLQRESRSSHDPLHQNGGKYLNILQSIGHSVHILDLQCRIIYWNPSAENLYGYTAEEALGHDVIEMLVDPSEFGLASDIINRVKMGESWTGQFPVKNKMGDRFVVVATNTPFYDDDGSLIGVICASSDSRPFLENIVPFSVGKNEAKDSGVNFPRNAITNKLGLDPQQPLQNALASKISNLATKVSNKVKSKIRTRENGVGGEGGSGESHHSEHGFSDYGHSDQREDGANSSGASTPAGEVPPTPFGSFTHVEEKSQGKTMRNSSDESEEKPIHKIITSKAEAWIQKKTMSWPWKANDREESESKNVRVSWPWMQGDQEKGSTNQKNLSSGLKPPESRAAESYQHVQNEASGGSWSSFNVNSTSSTSSCGSGSGSSSAANNRVDVDSDCLDYEILWEDLTIGESIGQGSCGTVYHALWYGSDVAVKVFSKQEYSEDLIQSFRQEVSLMKRLRHPNILLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTSKPDWRRRVHMALDIARGVNYLHHCNPPIIHRDLKTSNLLVDKNWTVKVGDFGLSRIKHETYLETKTGKGTPQWMAPEVLRNEPSNEKSDVYSFGVIMWELATEKIPWDTLNAMQVIGAVGFMNHRLEIPEDIDPQWASIIESCWHTDPASRPTFQELLERLKELQRRYAIQFQAARSAVGENTQRSPS 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01719 749 ProSitePatterns Serine/Threonine protein kinases active-site signature. 589 601 IPR008271 GO:0004672|GO:0006468
Tsu07g01719 749 TIGRFAM sensory_box: PAS domain S-box protein 91 197 IPR000014 -
Tsu07g01719 749 MobiDBLite consensus disorder prediction 25 85 - -
Tsu07g01719 749 ProSiteProfiles Protein kinase domain profile. 470 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01719 749 SMART pas_2 89 156 IPR000014 -
Tsu07g01719 749 ProSiteProfiles PAS repeat profile. 87 158 IPR000014 -
Tsu07g01719 749 MobiDBLite consensus disorder prediction 379 403 - -
Tsu07g01719 749 MobiDBLite consensus disorder prediction 44 77 - -
Tsu07g01719 749 CDD PAS 102 199 IPR000014 -
Tsu07g01719 749 PRINTS Tyrosine kinase catalytic domain signature 544 557 IPR001245 GO:0004672|GO:0006468
Tsu07g01719 749 PRINTS Tyrosine kinase catalytic domain signature 583 601 IPR001245 GO:0004672|GO:0006468
Tsu07g01719 749 PRINTS Tyrosine kinase catalytic domain signature 630 640 IPR001245 GO:0004672|GO:0006468
Tsu07g01719 749 PRINTS Tyrosine kinase catalytic domain signature 649 671 IPR001245 GO:0004672|GO:0006468
Tsu07g01719 749 PRINTS Tyrosine kinase catalytic domain signature 693 715 IPR001245 GO:0004672|GO:0006468
Tsu07g01719 749 MobiDBLite consensus disorder prediction 259 344 - -
Tsu07g01719 749 Gene3D Phosphorylase Kinase; domain 1 463 547 - -
Tsu07g01719 749 SUPERFAMILY Protein kinase-like (PK-like) 459 722 IPR011009 -
Tsu07g01719 749 Gene3D PAS domain 100 201 - -
Tsu07g01719 749 SUPERFAMILY PYP-like sensor domain (PAS domain) 93 195 IPR035965 -
Tsu07g01719 749 SMART serkin_6 470 730 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g01719 749 Pfam PAS domain 103 199 IPR000014 -
Tsu07g01719 749 MobiDBLite consensus disorder prediction 412 428 - -
Tsu07g01719 749 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 26 745 - -
Tsu07g01719 749 MobiDBLite consensus disorder prediction 278 296 - -
Tsu07g01719 749 MobiDBLite consensus disorder prediction 326 344 - -
Tsu07g01719 749 MobiDBLite consensus disorder prediction 366 428 - -
Tsu07g01719 749 Pfam Protein tyrosine and serine/threonine kinase 470 722 IPR001245 GO:0004672|GO:0006468
Tsu07g01719 749 CDD STKc_MAP3K-like 476 722 - -
Tsu07g01719 749 PANTHER SERINE/THREONINE-PROTEIN KINASE DDB_G0282963 ISOFORM X1-RELATED 26 745 - -
Tsu07g01719 749 Coils Coil 715 735 - -
Tsu07g01719 749 Gene3D Transferase(Phosphotransferase) domain 1 548 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01719 Tsu-Chr7 16940008 16945886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01719 1 744 MAP Kinase Kinase Kinase AT3G06620 58.301 0.0 869
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Tsu07g01719 PK_Tyr_Ser-Thr 1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01719 - - gmx:100815858 1038.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01719 07 16940008 16945886 Tsu07g01719 07 16940008 16945886 ECH