Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01714 ATGAAAATTCTcctttttatcttattttttgtacCATATTGTGCTCTTGCCTTTGATGTAAAAAATGTTATAGACTCTCCTATGTTAACAAAAAAGGTAGGAACTAATCGTACTATTATAGTTGATATCAATGGAAATGGAGATTTTAAATCAGTTCAAGCTgcaattgattcaattcctgAAGGAAATTCTCAATGGACCATTGTTCATATTAGAAAAGGAGTATATAGAGAAAAAGTGCACATACCAAAGACTAAGCGTTACATATTCTTGAGAGGAAATGGAAGAGGAAAAACTGCCATTGTTTGGTCTGAAAGCTCATCTGACAATATAGCTTCTGCCACCTTCAGAGCTGAAGCCCCTGACTTCATTGCCTTTGGAATTAGCTTCAAGAATGAGGCACCAACAGGGGTTGCATATACTTCACAAAATCAATCAGTGGCAGCATTTGTGGCAGCAGATAAAATAGCATTTTACCATTGTGCATTTTATAGTACACATAATACACTCTTTGATTACAAAGGTAGACATTATTATGAGTCATGTTACATTCAAGGCTCCATTGATTTCATATTTGGTCGTGCCAGAACACATTTTCATAGTTGTGAGATATTTGTGGTTGATGATAAAAGGATAACAATTAGAGGTTCAATTACAGCTGCAAGTagagaaaatgaaattgaaatgaatggatatatatttattaaatgcAAAGTTTATGGCATTGGTGGTGTGTACTTAGGAAGGGCTAAAGGTCCTTATTCTAGGGTCATTTTTGCTCACACATACCTCTCCAATTCCATTGTCCCAGAAGGATGGACCAATTGGAGTTATGATGGTACCACAGAACATCTTTATCATGCTGAGTATAAAAATCATGGACCTGGAGCAAGATCAGAAGGAAGAGCTCCTTGGTCAAGACAACTTAGTGATGAACAAGCTGCTCCATTTTTAGATATTAATTACATTGATGGAAAGAATTGGTTGCCAGCATATCTATAA 1002 0.3343 MKILLFILFFVPYCALAFDVKNVIDSPMLTKKVGTNRTIIVDINGNGDFKSVQAAIDSIPEGNSQWTIVHIRKGVYREKVHIPKTKRYIFLRGNGRGKTAIVWSESSSDNIASATFRAEAPDFIAFGISFKNEAPTGVAYTSQNQSVAAFVAADKIAFYHCAFYSTHNTLFDYKGRHYYESCYIQGSIDFIFGRARTHFHSCEIFVVDDKRITIRGSITAASRENEIEMNGYIFIKCKVYGIGGVYLGRAKGPYSRVIFAHTYLSNSIVPEGWTNWSYDGTTEHLYHAEYKNHGPGARSEGRAPWSRQLSDEQAAPFLDINYIDGKNWLPAYL 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01714 333 Pfam Pectinesterase 39 325 IPR000070 GO:0030599|GO:0042545
Tsu07g01714 333 PANTHER PECTINESTERASE 67-RELATED 4 332 - -
Tsu07g01714 333 Gene3D - 33 332 IPR012334 -
Tsu07g01714 333 ProSitePatterns Pectinesterase signature 2. 184 193 IPR033131 -
Tsu07g01714 333 SUPERFAMILY Pectin lyase-like 35 331 IPR011050 -
Tsu07g01714 333 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 4 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01714 Tsu-Chr7 16895711 16898137 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01714 35 329 Carbohydrate Esterase AT1G05310 38.411 7.07e-71 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01714 - - mtr:MTR_2g033970 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01714 07 16895711 16898137 Tsu07g01714 07 16895711 16898137 ECH