Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01707 AtggaggagaagaagagagaagagaacaGAAACCCCACCAACTCATCatcaaccaccaccaccatgaCATTTTCCGACGATATtcccaccaccaccaacacaaCTTTATTCCCTTTTCAACCTTCAATTTCCACCTTCTTTGACACCATGTCATCTTCCGACCAAAAAGCATCATCTTTTGGATTCATGGACATGTTGGGTTCCCATGATTAcatcaacaacaattttttattatctgATTGGGGTCTTCCCACTGTTGCAACATCTCATCACCCTCTTCCTTTGCCCGTGAGTTCTAACGTCCCAGCGGAGTCTGCCTCTGGGACGTTGAACACTCCGGTGTCACCAAATTCTACTTCAATTTCTTCGTCTTCTAATGAAGCCACGGTTAATGAGTCGTTAGAACATAATAGAAGTAAAGTCTCAAGAAATGAAAATGATGCAGAGGTAGAAGAAGATGTAAATGGAGGCAGAGGAGATGAACAAGATCAAGACAAGTCTAAGAAACAATTGAAAGCAAAGAAGAAGAACCAAAAAAAGGAAAGAGAACCCAGATTTGCTTTCATGACAAAGAGTGAAGTTGATCATCTAGACGATGGCTATAGGTGGCGTAAATACGGTCAAAAAGCTGTGAAAAACAGTCCTTATCCCAGGAGCTACTATCGTTGTACAACAGCAAGTTGCGGCGTGAAAAAACGCGTGGAGCGTTCATCTAATGATTCTTCCATTGTCGTAACTACATATGAAGGTCAACACACACATCCTTCTCCTGCCACGTCACGTCATCCTAACCTCAGCTTCGTCAACAACGAACCTACTGCTTCGGGTTCGCACTCACACTTTCTTCTACCAACATTGTTGTAcaatagtagtagtaatattAACCCCACTAGtaatattattactactactactacaccccctacttcttcttcttatgTTGGTGCTTCTAGTGGTACTTATCTTAACACGTCGTCATTTGGTGGTTTTGTTCATGACCAAGGGATTAATCATATAAGAGAGGCTTTGTTAAGAGATAATGGGTTGCTTCAAGATATTTTTCAGATCAAAAAAGAGGAGAAAGATTCGGTCAAAGAACATTAG 1104 0.3578 MEEKKREENRNPTNSSSTTTTMTFSDDIPTTTNTTLFPFQPSISTFFDTMSSSDQKASSFGFMDMLGSHDYINNNFLLSDWGLPTVATSHHPLPLPVSSNVPAESASGTLNTPVSPNSTSISSSSNEATVNESLEHNRSKVSRNENDAEVEEDVNGGRGDEQDQDKSKKQLKAKKKNQKKEREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTASCGVKKRVERSSNDSSIVVTTYEGQHTHPSPATSRHPNLSFVNNEPTASGSHSHFLLPTLLYNSSSNINPTSNIITTTTTPPTSSSYVGASSGTYLNTSSFGGFVHDQGINHIREALLRDNGLLQDIFQIKKEEKDSVKEH 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01707 367 SMART WRKY_cls 197 256 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g01707 367 MobiDBLite consensus disorder prediction 99 132 - -
Tsu07g01707 367 Coils Coil 131 151 - -
Tsu07g01707 367 MobiDBLite consensus disorder prediction 133 170 - -
Tsu07g01707 367 Pfam WRKY DNA -binding domain 198 255 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g01707 367 Gene3D WRKY domain 182 258 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu07g01707 367 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 57 356 IPR044810 GO:0003700
Tsu07g01707 367 PANTHER WRKY TRANSCRIPTION FACTOR 48-RELATED 57 356 - -
Tsu07g01707 367 SUPERFAMILY WRKY DNA-binding domain 189 257 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tsu07g01707 367 MobiDBLite consensus disorder prediction 12 29 - -
Tsu07g01707 367 ProSiteProfiles WRKY domain profile. 192 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tsu07g01707 367 MobiDBLite consensus disorder prediction 99 185 - -
Tsu07g01707 367 Coils Coil 161 181 - -
Tsu07g01707 367 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01707 Tsu-Chr7 16758878 16761552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01707 39 360 WRKY Transcription Factor Family AT2G47260 40.290 1.94e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tsu07g01707 WRKY 3.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01707 - - mtr:MTR_2g033820 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g01707 07 16758878 16761552 Tsu07g01707 07 16758878 16761552 ECH