Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g01674 ATGATGAAGGAATGTGATTATCTCTACGCTTCGAGTGTAATGCACAAACCTAAGAAACGGTTAAGGGAATTCGGTGACACCGTTGATTGTAACCGTTACTCACTCGATGATTCTGTAACCGTTGATCAATGTGCTTTGCGTCTTCACCGTCTGATCAACGGTGACTGGATCCCACCTCTCCTTCAAGCACAGGCAAAACCACCTGAGATGAAGAAAAAGCCTAAGTTCATAATCAAATTCACGGGGAAGTCAAAAAACGAGTCCAAATTTAAAAGTGGGGAAACAGTGGAAGTTAGCAACGACGGTGAAGGTTATAAAGGTGCTTGGTTTGTTGCTACTGTTATTGACAAGttagaaaaagaaagatttgtaGTTGAATACAAAGATTTGGTGACAAATGATGATGGTACTCGACTTCTGAAAGAAGAAATTGATGCTAAGTTTATTAGGCCTTGTCCTCCTCATGTTCCAAATTTTGGTTCTTTCAAAAAGTTACAAGAAGTTGGTGCATGGTACAATGATGCTTGGTGGGAAGGCGTAGTTGTTGAATTAGTGAACACGACAGAGTGTTTTGTTCGTTTTATGGATAATGAAGTGTTGAAAATTGAATGTTTGAAGTTAAGACCTCATCAAGATTGGATTAATGGAAAATGGATCATGTCTTCCAAGGAGCCGAGTGAGCTAGTGAAGAAGTTTGGAGATGTGATACCGAAAGCCAACAATCTAGCcggaacaaaattgattttgaaatatcCAATTCTTTGTGAGAATGCAAAGCAACCTACATCTGTAATAACAAGGACACTATACACTAGAAGAAAATTTGATTTACAATTCTACAAAGGGGAAAAGGTAGAAGTTAGAAGCGATGAAAAAGGCCATGAAGGTTCATGGTATACAGCAACTGTTGTCGATTTCTTGCATAATGGAAAGTACTTGGTGGAGTATTTGACACTGAAAACAGATGACTTAACAGACCAACTGAAAGAAGAAGTAAATGTTTCAGATATTAGACCGTGTCCGCCTGATATCAATCGTTTTTGTCGATTTGTGACACAACAAAGGGTTGATGTTTGGTATAATGATGGATGGTGGGAAGGTGTAGTATCTAATGTTGCTCATGGTTTCAAGTATATGGTTTATTTTTGGACTTCAAATGAGGAGCTGGAATTTGAACATTGTTATCTTAGGCCGCATCAAGATTGGATTGATGGAAGATGGATGCTCGCTTCTTCGGTATGA 1242 0.3768 MMKECDYLYASSVMHKPKKRLREFGDTVDCNRYSLDDSVTVDQCALRLHRLINGDWIPPLLQAQAKPPEMKKKPKFIIKFTGKSKNESKFKSGETVEVSNDGEGYKGAWFVATVIDKLEKERFVVEYKDLVTNDDGTRLLKEEIDAKFIRPCPPHVPNFGSFKKLQEVGAWYNDAWWEGVVVELVNTTECFVRFMDNEVLKIECLKLRPHQDWINGKWIMSSKEPSELVKKFGDVIPKANNLAGTKLILKYPILCENAKQPTSVITRTLYTRRKFDLQFYKGEKVEVRSDEKGHEGSWYTATVVDFLHNGKYLVEYLTLKTDDLTDQLKEEVNVSDIRPCPPDINRFCRFVTQQRVDVWYNDGWWEGVVSNVAHGFKYMVYFWTSNEELEFEHCYLRPHQDWIDGRWMLASSV 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g01674 413 SMART agenet_At_2 277 345 IPR014002 -
Tsu07g01674 413 SMART agenet_At_2 348 404 IPR014002 -
Tsu07g01674 413 SMART agenet_At_2 160 215 IPR014002 -
Tsu07g01674 413 SMART agenet_At_2 88 157 IPR014002 -
Tsu07g01674 413 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 19 413 - -
Tsu07g01674 413 CDD TUDOR 282 339 IPR002999 -
Tsu07g01674 413 Gene3D - 269 347 - -
Tsu07g01674 413 Gene3D - 78 159 - -
Tsu07g01674 413 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 19 413 - -
Tsu07g01674 413 Pfam Agenet domain 93 154 IPR008395 -
Tsu07g01674 413 Pfam Agenet domain 282 342 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g01674 Tsu-Chr7 15974057 15976729 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g01674 288 402 PHD Transcription Factor Family AT5G58610 33.088 9.36e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g01674 - - mtr:MTR_2g033390 534.643